Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.62□□□□□ -1.83
CASQ1P31415 RRM2P4-201ENST00000441721 562 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 snoU13.4-201ENST00000458916 104 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 AL133162.1-201ENST00000463228 453 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 GAPDHP39-201ENST00000481866 979 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.62□□□□□ -1.83
CASQ1P31415 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.62□□□□□ -1.83
CASQ1P31415 HMGB1P3-201ENST00000502802 616 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 AC004062.1-201ENST00000509926 645 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 RANP9-201ENST00000519957 271 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.62□□□□□ -1.83
CASQ1P31415 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.62□□□□□ -1.83
CASQ1P31415 AC074029.2-201ENST00000551045 634 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.62□□□□□ -1.83
CASQ1P31415 BNIP3P5-201ENST00000562290 498 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CASQ1P31415 AC023575.1-201ENST00000580510 358 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 AC103881.1-201ENST00000603476 538 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 AC073111.2-201ENST00000605657 1075 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 AP000894.4-201ENST00000610185 483 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 AC084035.1-201ENST00000634543 607 ntBASIC3.62□□□□□ -1.83
CASQ1P31415 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CASQ1P31415 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.62□□□□□ -1.83
CASQ1P31415 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.62□□□□□ -1.83
CASQ1P31415 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CASQ1P31415 U3.6-201ENST00000363622 211 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 RNA5SP344-201ENST00000411081 104 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.61□□□□□ -1.83
CASQ1P31415 AC010385.1-201ENST00000412374 256 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 TCEA1P4-201ENST00000415066 844 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 DBIP2-201ENST00000419076 262 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 MTATP6P4-201ENST00000427725 675 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 AC115115.1-201ENST00000449927 248 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 AP002345.1-201ENST00000456493 928 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.61□□□□□ -1.83
CASQ1P31415 AC111000.2-201ENST00000507775 550 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 KLHL2P1-201ENST00000508691 521 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 AC093770.1-201ENST00000511559 571 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.61□□□□□ -1.83
CASQ1P31415 SNORA31.1-201ENST00000515993 133 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 SNORA31.5-201ENST00000516190 133 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.61□□□□□ -1.83
CASQ1P31415 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.61□□□□□ -1.83
CASQ1P31415 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.61□□□□□ -1.83
CASQ1P31415 MTCYBP28-201ENST00000566728 1132 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 MIR4504-201ENST00000577413 92 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.61□□□□□ -1.83
CASQ1P31415 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.61□□□□□ -1.83
CASQ1P31415 AC022509.4-201ENST00000621404 572 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 AC010435.1-201ENST00000623353 1177 ntBASIC3.61□□□□□ -1.83
CASQ1P31415 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.61□□□□□ -1.83
CASQ1P31415 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CASQ1P31415 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.61□□□□□ -1.83
CASQ1P31415 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CASQ1P31415 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.6□□□□□ -1.83
CASQ1P31415 AC093831.2-201ENST00000624393 3427 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.6□□□□□ -1.83
CASQ1P31415 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CASQ1P31415 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CASQ1P31415 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CASQ1P31415 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CASQ1P31415 SNORA51.4-201ENST00000364993 124 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AC073264.1-201ENST00000411508 416 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.6□□□□□ -1.83
CASQ1P31415 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CASQ1P31415 AL356806.1-201ENST00000422524 916 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 FO393419.3-201ENST00000428741 282 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 CST9LP2-201ENST00000437612 320 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 RABEPKP1-201ENST00000440529 1026 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.6□□□□□ -1.83
CASQ1P31415 AC006326.1-201ENST00000445465 787 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.6□□□□□ -1.83
CASQ1P31415 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.6□□□□□ -1.83
CASQ1P31415 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.6□□□□□ -1.83
CASQ1P31415 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.6□□□□□ -1.83
CASQ1P31415 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.6□□□□□ -1.83
CASQ1P31415 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.6□□□□□ -1.83
CASQ1P31415 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.6□□□□□ -1.83
CASQ1P31415 AC147055.1-201ENST00000509261 750 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 MTCYBP37-201ENST00000510642 1133 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AC105914.1-201ENST00000511798 226 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AP001207.2-201ENST00000519490 539 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.6□□□□□ -1.83
CASQ1P31415 AC022690.1-201ENST00000526681 550 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.6□□□□□ -1.83
CASQ1P31415 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.6□□□□□ -1.83
CASQ1P31415 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
CASQ1P31415 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.6□□□□□ -1.83
CASQ1P31415 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.6□□□□□ -1.83
CASQ1P31415 AC068790.4-201ENST00000602474 263 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AC002076.2-201ENST00000617362 122 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AP003122.6-201ENST00000623831 495 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AC073342.3-201ENST00000624211 193 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.6□□□□□ -1.83
CASQ1P31415 ZNF807-201ENST00000328088 1707 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 MTND5P19-201ENST00000424872 1794 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 AL356274.2-201ENST00000624379 3752 ntBASIC3.6□□□□□ -1.83
CASQ1P31415 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CASQ1P31415 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms