Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.14□□□□□ -1.75
CPS1P31327 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.14□□□□□ -1.75
CPS1P31327 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPS1P31327 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CPS1P31327 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.13□□□□□ -1.75
CPS1P31327 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CPS1P31327 AC006840.1-201ENST00000623069 542 ntBASIC4.13□□□□□ -1.75
CPS1P31327 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.13□□□□□ -1.75
CPS1P31327 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.13□□□□□ -1.75
CPS1P31327 AL592494.2-201ENST00000425455 1548 ntBASIC4.12□□□□□ -1.75
CPS1P31327 GABRG2-229ENST00000641017 3628 ntBASIC4.12□□□□□ -1.75
CPS1P31327 MIR592-201ENST00000384959 97 ntBASIC4.12□□□□□ -1.75
CPS1P31327 RPL30P2-201ENST00000414021 291 ntBASIC4.12□□□□□ -1.75
CPS1P31327 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.12□□□□□ -1.75
CPS1P31327 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.12□□□□□ -1.75
CPS1P31327 DUTP6-201ENST00000425573 462 ntBASIC4.12□□□□□ -1.75
CPS1P31327 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.12□□□□□ -1.75
CPS1P31327 VN1R48P-201ENST00000448149 1036 ntBASIC4.12□□□□□ -1.75
CPS1P31327 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.12□□□□□ -1.75
CPS1P31327 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.12□□□□□ -1.75
CPS1P31327 AC132942.1-201ENST00000486753 483 ntBASIC4.12□□□□□ -1.75
CPS1P31327 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.12□□□□□ -1.75
CPS1P31327 RN7SKP283-201ENST00000517197 270 ntBASIC4.12□□□□□ -1.75
CPS1P31327 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
CPS1P31327 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.12□□□□□ -1.75
CPS1P31327 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.12□□□□□ -1.75
CPS1P31327 AC015911.5-201ENST00000587076 451 ntBASIC4.12□□□□□ -1.75
CPS1P31327 AP004607.9-201ENST00000618202 316 ntBASIC4.12□□□□□ -1.75
CPS1P31327 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CPS1P31327 NEAT1-202ENST00000501122 22743 ntBASIC4.12□□□□□ -1.75
CPS1P31327 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.11□□□□□ -1.75
CPS1P31327 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPS1P31327 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CPS1P31327 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPS1P31327 RN7SKP247-201ENST00000411094 308 ntBASIC4.11□□□□□ -1.75
CPS1P31327 RAC1P3-201ENST00000416129 580 ntBASIC4.11□□□□□ -1.75
CPS1P31327 AL591806.2-201ENST00000433122 173 ntBASIC4.11□□□□□ -1.75
CPS1P31327 RPL7P12-201ENST00000446719 750 ntBASIC4.11□□□□□ -1.75
CPS1P31327 AC010401.1-201ENST00000463867 348 ntBASIC4.11□□□□□ -1.75
CPS1P31327 AC006445.2-201ENST00000510061 472 ntBASIC4.11□□□□□ -1.75
CPS1P31327 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.11□□□□□ -1.75
CPS1P31327 TRAV37-201ENST00000553906 342 ntBASIC4.11□□□□□ -1.75
CPS1P31327 AC025946.2-201ENST00000603398 234 ntBASIC4.11□□□□□ -1.75
CPS1P31327 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.11□□□□□ -1.75
CPS1P31327 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.11□□□□□ -1.75
CPS1P31327 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.11□□□□□ -1.75
CPS1P31327 RPS4XP5-202ENST00000449995 1334 ntBASIC4.11□□□□□ -1.75
CPS1P31327 AC007336.1-201ENST00000576365 3828 ntBASIC4.11□□□□□ -1.75
CPS1P31327 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CPS1P31327 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CPS1P31327 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CPS1P31327 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.11□□□□□ -1.75
CPS1P31327 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.11□□□□□ -1.75
CPS1P31327 AC108078.3-201ENST00000502633 489 ntBASIC4.11□□□□□ -1.75
CPS1P31327 AC021146.1-201ENST00000511202 716 ntBASIC4.11□□□□□ -1.75
CPS1P31327 AC015712.3-201ENST00000559380 164 ntBASIC4.11□□□□□ -1.75
CPS1P31327 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CPS1P31327 AC078899.3-201ENST00000599065 212 ntBASIC4.11□□□□□ -1.75
CPS1P31327 RMST_8.1-201ENST00000610287 165 ntBASIC4.11□□□□□ -1.75
CPS1P31327 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.1□□□□□ -1.75
CPS1P31327 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
CPS1P31327 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CPS1P31327 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CPS1P31327 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CPS1P31327 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CPS1P31327 RNA5SP68-201ENST00000363885 119 ntBASIC4.1□□□□□ -1.75
CPS1P31327 AL139039.1-201ENST00000401900 692 ntBASIC4.1□□□□□ -1.75
CPS1P31327 TRGV5P-201ENST00000419915 354 ntBASIC4.1□□□□□ -1.75
CPS1P31327 HMGN1P18-201ENST00000457642 277 ntBASIC4.1□□□□□ -1.75
CPS1P31327 AC008507.1-201ENST00000587506 734 ntBASIC4.1□□□□□ -1.75
CPS1P31327 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CPS1P31327 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CPS1P31327 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CPS1P31327 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.09□□□□□ -1.75
CPS1P31327 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CPS1P31327 MTCO1P7-201ENST00000419523 1542 ntBASIC4.09□□□□□ -1.75
CPS1P31327 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CPS1P31327 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CPS1P31327 RNA5SP21-201ENST00000410917 96 ntBASIC4.09□□□□□ -1.75
CPS1P31327 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.09□□□□□ -1.75
CPS1P31327 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.09□□□□□ -1.75
CPS1P31327 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.09□□□□□ -1.75
CPS1P31327 AL365396.1-201ENST00000430854 671 ntBASIC4.09□□□□□ -1.75
CPS1P31327 RNU6-548P-201ENST00000517083 115 ntBASIC4.09□□□□□ -1.75
CPS1P31327 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.09□□□□□ -1.75
CPS1P31327 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.09□□□□□ -1.75
CPS1P31327 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.09□□□□□ -1.75
CPS1P31327 AC022509.4-201ENST00000621404 572 ntBASIC4.09□□□□□ -1.75
CPS1P31327 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CPS1P31327 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CPS1P31327 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CPS1P31327 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CPS1P31327 AC110754.1-201ENST00000399740 601 ntBASIC4.08□□□□□ -1.76
CPS1P31327 RPS12P5-201ENST00000423449 371 ntBASIC4.08□□□□□ -1.76
CPS1P31327 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CPS1P31327 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.08□□□□□ -1.76
CPS1P31327 AC117522.3-201ENST00000507974 584 ntBASIC4.08□□□□□ -1.76
CPS1P31327 AC018797.3-201ENST00000513388 1241 ntBASIC4.08□□□□□ -1.76
CPS1P31327 RNA5SP217-201ENST00000515959 91 ntBASIC4.08□□□□□ -1.76
CPS1P31327 AP003122.3-201ENST00000526316 255 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms