Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
HOXD11P31277 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.24□□□□□ -1.09
HOXD11P31277 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.24□□□□□ -1.09
HOXD11P31277 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.24□□□□□ -1.09
HOXD11P31277 CARF-201ENST00000320443 5209 ntTSL 2 BASIC8.24□□□□□ -1.09
HOXD11P31277 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
HOXD11P31277 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
HOXD11P31277 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
HOXD11P31277 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
HOXD11P31277 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 AL022323.2-201ENST00000623239 3000 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC8.23□□□□□ -1.09
HOXD11P31277 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXD11P31277 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 EFHC1-213ENST00000635996 2548 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXD11P31277 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
HOXD11P31277 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HOXD11P31277 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXD11P31277 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXD11P31277 AC245028.1-201ENST00000423259 256 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 MTND6P12-201ENST00000428247 522 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.23□□□□□ -1.09
HOXD11P31277 CALM2P4-201ENST00000430810 426 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 TDGF1P1-201ENST00000445734 527 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 COX6CP6-201ENST00000490840 228 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 RNU4ATAC12P-201ENST00000516460 113 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 SNX18P27-201ENST00000523611 779 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.23□□□□□ -1.09
HOXD11P31277 RN7SL32P-201ENST00000580514 281 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.23□□□□□ -1.09
HOXD11P31277 AC007216.5-201ENST00000612457 109 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 STRADA-224ENST00000617949 705 ntTSL 2 BASIC8.23□□□□□ -1.09
HOXD11P31277 AC138932.4-201ENST00000619102 109 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 AC138969.4-201ENST00000620593 109 ntBASIC8.23□□□□□ -1.09
HOXD11P31277 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
HOXD11P31277 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC8.23□□□□□ -1.09
HOXD11P31277 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
HOXD11P31277 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.23□□□□□ -1.09
HOXD11P31277 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
HOXD11P31277 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HOXD11P31277 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
HOXD11P31277 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC8.22□□□□□ -1.09
HOXD11P31277 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 Y_RNA.107-201ENST00000363190 121 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 SNORA36B-201ENST00000410438 131 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXD11P31277 AC098614.2-201ENST00000426040 255 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 AC091390.3-201ENST00000426478 338 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXD11P31277 EIF4A2P5-201ENST00000529914 499 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXD11P31277 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.22□□□□□ -1.09
HOXD11P31277 RN7SL66P-201ENST00000582099 264 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 AC025946.2-201ENST00000603398 234 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 AC099778.2-201ENST00000610904 211 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 AC211433.3-201ENST00000623770 375 ntBASIC8.22□□□□□ -1.09
HOXD11P31277 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.22□□□□□ -1.09
HOXD11P31277 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
HOXD11P31277 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.22□□□□□ -1.09
HOXD11P31277 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC8.22□□□□□ -1.09
HOXD11P31277 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HOXD11P31277 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms