Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 AC011155.1-201ENST00000316512 456 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC12P31275 AL591416.1-201ENST00000404015 867 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC12P31275 MTCO3P12-201ENST00000416718 547 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 AC127526.1-201ENST00000417526 366 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC12P31275 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXC12P31275 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC12P31275 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC12P31275 AC093156.1-201ENST00000440382 670 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 AC079781.2-201ENST00000446424 169 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HOXC12P31275 AC068769.1-201ENST00000474767 2426 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 RPL38P3-201ENST00000484463 213 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 AC139783.2-201ENST00000504847 1145 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 COX7A2P2-201ENST00000505291 250 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXC12P31275 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC12P31275 SNORA40.12-201ENST00000516329 111 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 SCARNA24.1-201ENST00000516465 137 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 RNU6-410P-201ENST00000517006 107 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC12P31275 OR4P1P-201ENST00000530808 1136 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC12P31275 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXC12P31275 AL163952.1-202ENST00000569625 600 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC12P31275 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC12P31275 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC12P31275 MIR7155-201ENST00000615925 56 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXC12P31275 BMS1P21-201ENST00000634565 365 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC12P31275 SAMMSON-227ENST00000642114 1199 ntBASIC5.1□□□□□ -1.59
HOXC12P31275 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HOXC12P31275 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HOXC12P31275 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
HOXC12P31275 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC12P31275 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC12P31275 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 C4BPAP1-201ENST00000415474 1893 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HOXC12P31275 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 RNU4-73P-201ENST00000363164 141 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 RNY3P13-201ENST00000365542 102 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 RNU6-767P-201ENST00000384132 107 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 Y_RNA.529-201ENST00000384586 119 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 Y_RNA.535-201ENST00000384612 99 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 Y_RNA.548-201ENST00000384656 105 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 ENSAP1-201ENST00000392855 326 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXC12P31275 RN7SKP29-201ENST00000410957 272 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 Y_RNA.625-201ENST00000411256 107 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 RPL12P34-201ENST00000424532 479 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 ATP5JP1-201ENST00000431631 322 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 AC140076.1-201ENST00000449897 361 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC12P31275 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC12P31275 RPS23P2-201ENST00000463671 415 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 COPS8P2-201ENST00000473228 627 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 AC093270.2-201ENST00000486157 792 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
HOXC12P31275 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 AC074255.1-201ENST00000511259 501 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 Y_RNA.675-201ENST00000516389 149 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 MIR2117-201ENST00000516780 80 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 AF186190.1-201ENST00000517470 480 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 AC139365.2-201ENST00000517972 253 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC12P31275 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXC12P31275 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXC12P31275 AC068446.3-201ENST00000555285 382 ntBASIC5.09□□□□□ -1.59
HOXC12P31275 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXC12P31275 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms