Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA11P31270 RPL36AP13-201ENST00000457490 317 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXA11P31270 RPS4XP15-201ENST00000489210 795 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 NPM1P41-201ENST00000512920 831 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXA11P31270 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXA11P31270 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA11P31270 MTCO1P49-201ENST00000523429 802 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 AC083923.1-201ENST00000523708 376 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXA11P31270 AC023161.2-201ENST00000551218 780 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXA11P31270 AC124068.1-201ENST00000563131 678 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 AC090751.1-201ENST00000566966 267 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA11P31270 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA11P31270 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXA11P31270 AP001981.2-201ENST00000603241 418 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 DUXAP11-201ENST00000603858 526 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 VN1R74P-201ENST00000613259 503 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 AC023509.5-201ENST00000617434 807 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 MIR6500-201ENST00000622700 86 ntBASIC4.43□□□□□ -1.7
HOXA11P31270 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXA11P31270 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXA11P31270 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA11P31270 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA11P31270 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXA11P31270 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 Y_RNA.192-201ENST00000363977 102 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 RNU6-213P-201ENST00000384051 104 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AL356473.1-201ENST00000406203 1408 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 AC098592.1-201ENST00000419352 333 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 RPL31P45-201ENST00000419532 356 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AC006960.1-201ENST00000419980 153 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA11P31270 RPS29P7-201ENST00000439662 171 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 TAF9P1-201ENST00000445421 515 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 RAD23BP3-201ENST00000454157 1152 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 TAF9P2-201ENST00000454958 515 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AL109741.2-201ENST00000455561 343 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AC005008.1-201ENST00000456151 612 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AP000926.1-201ENST00000479573 241 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 LINC00888-204ENST00000487386 421 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AC080014.1-201ENST00000496877 1201 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 SAP18P1-201ENST00000512058 390 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 MTND3P5-201ENST00000512798 333 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA11P31270 AC105185.1-201ENST00000518705 535 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AC124293.1-201ENST00000530034 493 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AP000619.3-201ENST00000535634 1127 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 ELOCP32-201ENST00000548625 324 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA11P31270 CYP2C60P-201ENST00000566088 139 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA11P31270 MIR3912-201ENST00000577566 105 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 AC022069.1-201ENST00000582910 658 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 MIR4999-201ENST00000585029 91 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA11P31270 AL606490.9-201ENST00000603331 271 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 AC090246.1-201ENST00000616499 426 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 AP005264.7-201ENST00000625003 745 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 MIR4278-201ENST00000636094 69 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA11P31270 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA11P31270 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 AL122126.1-201ENST00000546905 1318 ntBASIC4.42□□□□□ -1.7
HOXA11P31270 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXA11P31270 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXA11P31270 NEAT1-202ENST00000501122 22743 ntBASIC4.41□□□□□ -1.7
HOXA11P31270 AP000776.1-201ENST00000530032 1663 ntBASIC4.41□□□□□ -1.7
HOXA11P31270 MTCO1P6-201ENST00000481192 1384 ntBASIC4.41□□□□□ -1.7
HOXA11P31270 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms