Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMAP28067 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMAP28067 RNU6-837P-201ENST00000391056 108 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 RNU1-101P-201ENST00000391171 127 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AL589655.1-201ENST00000405398 482 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AL139247.1-201ENST00000422768 325 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AL353705.1-201ENST00000433468 480 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC114878.1-201ENST00000441166 358 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC023598.1-201ENST00000472521 361 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 RN7SL459P-201ENST00000481078 302 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC007536.1-201ENST00000533382 349 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 CYCSP30-201ENST00000546447 172 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC025884.1-201ENST00000556034 378 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 KATNBL1P1-201ENST00000605192 748 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC005344.1-201ENST00000613391 459 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC010435.1-201ENST00000623353 1177 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 AP003355.3-201ENST00000623465 114 ntBASIC2.95□□□□□ -1.94
HLA-DMAP28067 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DMAP28067 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DMAP28067 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DMAP28067 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 RNU6-1243P-201ENST00000364028 107 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 SNORA62-201ENST00000365493 153 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DMAP28067 OR52E6-202ENST00000379946 954 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 SNORA46-201ENST00000384762 135 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 AL591034.1-201ENST00000407447 340 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 RN7SKP53-201ENST00000411337 315 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 MTND4LP7-201ENST00000431728 294 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC069540.1-201ENST00000446320 988 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC008264.1-201ENST00000447612 367 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 RPL36AP33-201ENST00000450395 310 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 snoU13.3-201ENST00000459441 104 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 RPS7P7-201ENST00000463499 571 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC231760.1-201ENST00000498002 260 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 RNU6-711P-201ENST00000517255 106 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC107954.1-201ENST00000565906 727 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC019176.2-201ENST00000611579 315 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DMAP28067 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AL590240.3-201ENST00000621416 943 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AC073348.1-201ENST00000623002 331 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 LRRC77P-213ENST00000637727 880 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 AP004289.2-201ENST00000444413 1457 ntBASIC2.94□□□□□ -1.94
HLA-DMAP28067 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
HLA-DMAP28067 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DMAP28067 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DMAP28067 FRG1CP-201ENST00000358464 769 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DMAP28067 RNU6-629P-201ENST00000384061 103 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 MIR30B-201ENST00000384850 88 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DMAP28067 HSPE1P1-201ENST00000421494 318 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DMAP28067 YWHAZP7-201ENST00000436906 631 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DMAP28067 AC006326.1-201ENST00000445465 787 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DMAP28067 RPL7P59-201ENST00000447700 943 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 UQCRHP3-201ENST00000451503 251 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 AC097262.1-201ENST00000452559 548 ntBASIC2.93□□□□□ -1.94
HLA-DMAP28067 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DMAP28067 ST13P14-201ENST00000474095 734 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms