Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU6-956P-201ENST00000458868 103 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNRPA1P09661 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
SNRPA1P09661 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNRPA1P09661 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNRPA1P09661 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.28□□□□□ -1.56
SNRPA1P09661 LTV1P1-201ENST00000510683 1237 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SNRPA1P09661 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNRPA1P09661 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.28□□□□□ -1.56
SNRPA1P09661 SMARCE1P4-201ENST00000523647 241 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.28□□□□□ -1.56
SNRPA1P09661 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.28□□□□□ -1.56
SNRPA1P09661 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.28□□□□□ -1.56
SNRPA1P09661 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.28□□□□□ -1.56
SNRPA1P09661 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.28□□□□□ -1.56
SNRPA1P09661 RPL21P7-201ENST00000557463 483 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 MIR3158-1-201ENST00000583596 81 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.28□□□□□ -1.56
SNRPA1P09661 AC073648.5-201ENST00000603502 305 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 SNORD91B-202ENST00000608459 222 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 AC055764.2-201ENST00000610089 670 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 AC099669.2-201ENST00000616549 437 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 MIR6500-201ENST00000622700 86 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SNRPA1P09661 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.28□□□□□ -1.56
SNRPA1P09661 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNRPA1P09661 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNRPA1P09661 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.28□□□□□ -1.56
SNRPA1P09661 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SNRPA1P09661 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SNRPA1P09661 AL353743.4-201ENST00000422653 1547 ntBASIC5.28□□□□□ -1.56
SNRPA1P09661 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.27□□□□□ -1.57
SNRPA1P09661 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNRPA1P09661 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
SNRPA1P09661 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SNRPA1P09661 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SNRPA1P09661 ERCC6-202ENST00000374127 1782 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 FAM91A3P-201ENST00000456826 2544 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNRPA1P09661 RNU6-500P-201ENST00000362349 107 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 SNORA60-201ENST00000362396 134 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 RNU5D-1-201ENST00000363299 116 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 SNORA4.1-201ENST00000364263 144 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 MIR217-201ENST00000384817 110 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 MIR554-201ENST00000384874 96 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SNRPA1P09661 OR51A3P-201ENST00000413596 924 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 MED14P1-201ENST00000430517 648 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AL050321.1-201ENST00000432363 400 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.27□□□□□ -1.57
SNRPA1P09661 BMS1P19-201ENST00000433925 393 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 RPS25P9-201ENST00000435591 252 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 RPS24P1-201ENST00000438550 371 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 MTND1P30-201ENST00000441241 901 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 OR6C5P-201ENST00000452388 923 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AC072039.1-201ENST00000477611 581 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 ACTG1P13-201ENST00000486987 1043 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.27□□□□□ -1.57
SNRPA1P09661 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 AC104685.1-201ENST00000502445 371 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AC146944.2-203ENST00000502493 354 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 MTATP6P22-201ENST00000507369 598 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AC109471.1-201ENST00000511631 612 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AC139495.1-202ENST00000513164 354 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 RNU1-45P-201ENST00000517191 141 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.27□□□□□ -1.57
SNRPA1P09661 AC063950.1-201ENST00000552036 308 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 AL390334.1-201ENST00000556395 450 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.27□□□□□ -1.57
SNRPA1P09661 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 MIR4429-201ENST00000580105 73 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 MIR5684-201ENST00000585074 65 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 SLC25A36P1-201ENST00000590111 465 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AC133552.5-201ENST00000604266 540 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.27□□□□□ -1.57
SNRPA1P09661 AC006133.1-201ENST00000617106 264 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 AC138965.3-201ENST00000623875 498 ntBASIC5.27□□□□□ -1.57
SNRPA1P09661 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
SNRPA1P09661 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SNRPA1P09661 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
SNRPA1P09661 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNRPA1P09661 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNRPA1P09661 AC027514.1-201ENST00000588561 1603 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNRPA1P09661 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNRPA1P09661 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.26□□□□□ -1.57
SNRPA1P09661 CYP1D1P-201ENST00000416662 1433 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNRPA1P09661 RNU4-21P-201ENST00000362802 126 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 RNU6-621P-201ENST00000364752 109 ntBASIC5.26□□□□□ -1.57
SNRPA1P09661 AC009302.1-201ENST00000417147 390 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms