Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.32□□□□□ -1.72
RB1P06400 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.32□□□□□ -1.72
RB1P06400 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.32□□□□□ -1.72
RB1P06400 AC241584.1-201ENST00000438469 1241 ntBASIC4.32□□□□□ -1.72
RB1P06400 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.32□□□□□ -1.72
RB1P06400 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.32□□□□□ -1.72
RB1P06400 AL451050.1-201ENST00000450126 415 ntBASIC4.32□□□□□ -1.72
RB1P06400 ABCF2P2-201ENST00000450549 296 ntBASIC4.32□□□□□ -1.72
RB1P06400 MTCO3P35-201ENST00000485582 781 ntBASIC4.32□□□□□ -1.72
RB1P06400 AC114322.1-201ENST00000506771 926 ntBASIC4.32□□□□□ -1.72
RB1P06400 MTCYBP16-201ENST00000509187 1129 ntBASIC4.32□□□□□ -1.72
RB1P06400 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.32□□□□□ -1.72
RB1P06400 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.32□□□□□ -1.72
RB1P06400 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.32□□□□□ -1.72
RB1P06400 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.32□□□□□ -1.72
RB1P06400 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.32□□□□□ -1.72
RB1P06400 AC087808.1-201ENST00000520501 361 ntBASIC4.32□□□□□ -1.72
RB1P06400 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.32□□□□□ -1.72
RB1P06400 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.32□□□□□ -1.72
RB1P06400 AC063950.1-201ENST00000552036 308 ntBASIC4.32□□□□□ -1.72
RB1P06400 MTND1P24-201ENST00000552175 861 ntBASIC4.32□□□□□ -1.72
RB1P06400 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.32□□□□□ -1.72
RB1P06400 AADACP1-206ENST00000561502 1193 ntBASIC4.32□□□□□ -1.72
RB1P06400 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.32□□□□□ -1.72
RB1P06400 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.32□□□□□ -1.72
RB1P06400 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.32□□□□□ -1.72
RB1P06400 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.32□□□□□ -1.72
RB1P06400 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.32□□□□□ -1.72
RB1P06400 AC105429.2-201ENST00000610567 517 ntBASIC4.32□□□□□ -1.72
RB1P06400 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 AL034408.1-202ENST00000636088 415 ntBASIC4.32□□□□□ -1.72
RB1P06400 AC090897.3-201ENST00000636973 1157 ntBASIC4.32□□□□□ -1.72
RB1P06400 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
RB1P06400 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.32□□□□□ -1.72
RB1P06400 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RB1P06400 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RB1P06400 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RB1P06400 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.31□□□□□ -1.72
RB1P06400 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RB1P06400 AC117529.2-201ENST00000512159 2068 ntBASIC4.31□□□□□ -1.72
RB1P06400 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RB1P06400 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.31□□□□□ -1.72
RB1P06400 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.31□□□□□ -1.72
RB1P06400 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RB1P06400 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.31□□□□□ -1.72
RB1P06400 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.31□□□□□ -1.72
RB1P06400 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RB1P06400 RNU6-492P-201ENST00000363035 104 ntBASIC4.31□□□□□ -1.72
RB1P06400 RNU4-92P-201ENST00000363783 136 ntBASIC4.31□□□□□ -1.72
RB1P06400 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.31□□□□□ -1.72
RB1P06400 SNORA5A-201ENST00000384111 134 ntBASIC4.31□□□□□ -1.72
RB1P06400 MIR649-201ENST00000384843 97 ntBASIC4.31□□□□□ -1.72
RB1P06400 ERHP2-201ENST00000402323 299 ntBASIC4.31□□□□□ -1.72
RB1P06400 SSR1P2-201ENST00000415208 787 ntBASIC4.31□□□□□ -1.72
RB1P06400 AC092647.1-201ENST00000420654 287 ntBASIC4.31□□□□□ -1.72
RB1P06400 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.31□□□□□ -1.72
RB1P06400 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.31□□□□□ -1.72
RB1P06400 AL358472.1-201ENST00000431295 329 ntBASIC4.31□□□□□ -1.72
RB1P06400 TBCAP1-201ENST00000436520 327 ntBASIC4.31□□□□□ -1.72
RB1P06400 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.31□□□□□ -1.72
RB1P06400 AP000926.1-201ENST00000479573 241 ntBASIC4.31□□□□□ -1.72
RB1P06400 AC020699.1-201ENST00000505161 445 ntBASIC4.31□□□□□ -1.72
RB1P06400 RNU6-311P-201ENST00000516224 102 ntBASIC4.31□□□□□ -1.72
RB1P06400 SNORA48.10-201ENST00000516965 160 ntBASIC4.31□□□□□ -1.72
RB1P06400 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.31□□□□□ -1.72
RB1P06400 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.31□□□□□ -1.72
RB1P06400 AC090281.1-201ENST00000523019 276 ntBASIC4.31□□□□□ -1.72
RB1P06400 AP001189.2-201ENST00000527320 189 ntBASIC4.31□□□□□ -1.72
RB1P06400 AP000889.1-201ENST00000530968 660 ntBASIC4.31□□□□□ -1.72
RB1P06400 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.31□□□□□ -1.72
RB1P06400 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.31□□□□□ -1.72
RB1P06400 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.31□□□□□ -1.72
RB1P06400 GTF2IP8-201ENST00000560687 584 ntBASIC4.31□□□□□ -1.72
RB1P06400 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.31□□□□□ -1.72
RB1P06400 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.31□□□□□ -1.72
RB1P06400 AL139286.1-201ENST00000604465 483 ntBASIC4.31□□□□□ -1.72
RB1P06400 AL391497.1-201ENST00000608671 547 ntBASIC4.31□□□□□ -1.72
RB1P06400 AC005344.1-201ENST00000613391 459 ntBASIC4.31□□□□□ -1.72
RB1P06400 AC091953.5-201ENST00000622919 233 ntBASIC4.31□□□□□ -1.72
RB1P06400 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.31□□□□□ -1.72
RB1P06400 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.31□□□□□ -1.72
RB1P06400 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.31□□□□□ -1.72
RB1P06400 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RB1P06400 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RB1P06400 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.31□□□□□ -1.72
RB1P06400 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RB1P06400 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
RB1P06400 RNU6-1226P-201ENST00000384317 107 ntBASIC4.3□□□□□ -1.72
RB1P06400 SSXP10-201ENST00000402595 565 ntBASIC4.3□□□□□ -1.72
RB1P06400 AC073264.1-201ENST00000411508 416 ntBASIC4.3□□□□□ -1.72
RB1P06400 AL160275.2-201ENST00000412010 394 ntBASIC4.3□□□□□ -1.72
RB1P06400 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.3□□□□□ -1.72
RB1P06400 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms