Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFAP04085 AL513327.3-201ENST00000602618 469 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFAP04085 AP001784.1-201ENST00000624107 428 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 AC138305.3-201ENST00000624988 240 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFAP04085 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFAP04085 AL049767.1-202ENST00000637826 242 ntBASIC5.73□□□□□ -1.49
PDGFAP04085 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.73□□□□□ -1.49
PDGFAP04085 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.73□□□□□ -1.49
PDGFAP04085 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PDGFAP04085 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PDGFAP04085 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PDGFAP04085 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
PDGFAP04085 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFAP04085 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PDGFAP04085 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFAP04085 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PDGFAP04085 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFAP04085 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFAP04085 RBMY1HP-201ENST00000382759 1389 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
PDGFAP04085 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PDGFAP04085 MIR133A2-201ENST00000347538 102 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 Y_RNA.167-201ENST00000363735 109 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PDGFAP04085 RNU6-463P-201ENST00000384340 107 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 ENSAP1-201ENST00000392855 326 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 RNU6-387P-201ENST00000411331 105 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.72□□□□□ -1.49
PDGFAP04085 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFAP04085 RPS12P5-201ENST00000423449 371 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFAP04085 PRPF38AP2-201ENST00000438179 851 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC005094.1-201ENST00000440420 368 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFAP04085 AP000281.1-201ENST00000444036 316 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AP006222.1-205ENST00000450734 457 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC005008.1-201ENST00000456151 612 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
PDGFAP04085 RN7SL629P-201ENST00000489622 285 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 CCDC34P1-201ENST00000507441 517 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC002456.2-201ENST00000509356 380 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFAP04085 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFAP04085 RN7SKP24-201ENST00000515888 284 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFAP04085 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFAP04085 AP001858.2-201ENST00000536213 601 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFAP04085 AC024619.4-201ENST00000580924 316 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.72□□□□□ -1.49
PDGFAP04085 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.72□□□□□ -1.49
PDGFAP04085 AC013244.1-201ENST00000604279 193 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AL359704.2-201ENST00000604335 521 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC012443.1-201ENST00000605605 231 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 Z82243.1-201ENST00000609432 473 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 RNA5SP440-201ENST00000612665 119 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 RN7SL787P-201ENST00000613000 284 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC096861.1-201ENST00000616652 240 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AL136228.1-201ENST00000622221 319 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 AC244517.12-201ENST00000623581 663 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFAP04085 PHKBP1-201ENST00000450951 1951 ntBASIC5.72□□□□□ -1.49
PDGFAP04085 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFAP04085 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFAP04085 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PDGFAP04085 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFAP04085 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.72□□□□□ -1.49
PDGFAP04085 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PDGFAP04085 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PDGFAP04085 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
PDGFAP04085 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
PDGFAP04085 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDGFAP04085 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
PDGFAP04085 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDGFAP04085 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PDGFAP04085 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
PDGFAP04085 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
PDGFAP04085 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PDGFAP04085 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PDGFAP04085 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFAP04085 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFAP04085 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDGFAP04085 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 SHQ1P1-201ENST00000437111 1544 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 RNU1-49P-201ENST00000363468 159 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 RNU6-960P-201ENST00000364056 120 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 RNU6-61P-201ENST00000365528 109 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 SNORA24.1-201ENST00000384401 135 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDGFAP04085 MIR1203-201ENST00000408812 85 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 U3.43-201ENST00000410734 213 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AL591848.1-201ENST00000413092 322 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms