Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
USH2AO75445 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
USH2AO75445 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
USH2AO75445 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
USH2AO75445 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC1.29□□□□□ -2.2
USH2AO75445 AC009963.4-201ENST00000448535 339 ntBASIC1.29□□□□□ -2.2
USH2AO75445 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 AC117522.2-201ENST00000510049 657 ntBASIC1.29□□□□□ -2.2
USH2AO75445 FCF1P8-201ENST00000510322 597 ntBASIC1.29□□□□□ -2.2
USH2AO75445 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC1.29□□□□□ -2.2
USH2AO75445 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
USH2AO75445 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC1.29□□□□□ -2.2
USH2AO75445 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 RNY1-201ENST00000364228 113 ntBASIC1.29□□□□□ -2.2
USH2AO75445 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.29□□□□□ -2.2
USH2AO75445 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC1.29□□□□□ -2.2
USH2AO75445 RPS20P5-201ENST00000434808 360 ntBASIC1.29□□□□□ -2.2
USH2AO75445 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
USH2AO75445 HIGD1AP2-201ENST00000446367 280 ntBASIC1.29□□□□□ -2.2
USH2AO75445 RPL23AP15-201ENST00000450202 459 ntBASIC1.29□□□□□ -2.2
USH2AO75445 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.29□□□□□ -2.2
USH2AO75445 AC010503.3-201ENST00000594355 540 ntBASIC1.29□□□□□ -2.2
USH2AO75445 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 NEAT1-202ENST00000501122 22743 ntBASIC1.29□□□□□ -2.2
USH2AO75445 OSBPL9P4-201ENST00000371707 1800 ntBASIC1.29□□□□□ -2.2
USH2AO75445 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC1.29□□□□□ -2.2
USH2AO75445 AC027514.1-201ENST00000588561 1603 ntBASIC1.29□□□□□ -2.2
USH2AO75445 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.29□□□□□ -2.2
USH2AO75445 AC008716.1-201ENST00000511084 513 ntBASIC1.29□□□□□ -2.2
USH2AO75445 AC006518.1-201ENST00000541449 943 ntBASIC1.29□□□□□ -2.2
USH2AO75445 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC1.29□□□□□ -2.2
USH2AO75445 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC1.29□□□□□ -2.2
USH2AO75445 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 RNU1-112P-201ENST00000364401 164 ntBASIC1.29□□□□□ -2.2
USH2AO75445 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.29□□□□□ -2.2
USH2AO75445 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC1.29□□□□□ -2.2
USH2AO75445 DPRXP4-201ENST00000578053 568 ntBASIC1.29□□□□□ -2.2
USH2AO75445 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.29□□□□□ -2.2
USH2AO75445 AC023813.4-201ENST00000607580 580 ntBASIC1.29□□□□□ -2.2
USH2AO75445 PVT1_3.1-201ENST00000620853 95 ntBASIC1.29□□□□□ -2.2
USH2AO75445 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
USH2AO75445 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
USH2AO75445 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.29□□□□□ -2.2
USH2AO75445 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
USH2AO75445 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
USH2AO75445 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC1.28□□□□□ -2.2
USH2AO75445 NPM1P10-201ENST00000398310 865 ntBASIC1.28□□□□□ -2.2
USH2AO75445 DEFB109F-201ENST00000491870 277 ntBASIC1.28□□□□□ -2.2
USH2AO75445 MIR2276-201ENST00000516886 89 ntBASIC1.28□□□□□ -2.2
USH2AO75445 RN7SKP234-201ENST00000517173 224 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.28□□□□□ -2.2
USH2AO75445 UBTFL10-201ENST00000528532 562 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.28□□□□□ -2.2
USH2AO75445 AC010198.2-201ENST00000550612 259 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AC106785.3-201ENST00000564064 847 ntBASIC1.28□□□□□ -2.2
USH2AO75445 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
USH2AO75445 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 MIR3199-1-201ENST00000582434 88 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.28□□□□□ -2.2
USH2AO75445 AL139395.1-201ENST00000603662 160 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AC104237.2-201ENST00000612456 443 ntBASIC1.28□□□□□ -2.2
USH2AO75445 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AC006840.1-201ENST00000623069 542 ntBASIC1.28□□□□□ -2.2
USH2AO75445 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
USH2AO75445 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
USH2AO75445 MTND5P24-201ENST00000438892 1767 ntBASIC1.28□□□□□ -2.2
USH2AO75445 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
USH2AO75445 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
USH2AO75445 AC083843.2-201ENST00000568248 6253 ntBASIC1.28□□□□□ -2.2
USH2AO75445 MUC2-202ENST00000613187 4845 ntBASIC1.28□□□□□ -2.2
USH2AO75445 RNU6-321P-201ENST00000410912 106 ntBASIC1.28□□□□□ -2.2
USH2AO75445 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.28□□□□□ -2.2
USH2AO75445 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC1.28□□□□□ -2.2
USH2AO75445 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.28□□□□□ -2.2
USH2AO75445 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.28□□□□□ -2.2
USH2AO75445 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.28□□□□□ -2.2
USH2AO75445 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms