Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC009961.2-201ENST00000435771 251 ntBASIC6□□□□□ -1.45
GRIN3BO60391 RPS29P9-201ENST00000440360 171 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AC073465.2-201ENST00000440938 498 ntBASIC6□□□□□ -1.45
GRIN3BO60391 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC6□□□□□ -1.45
GRIN3BO60391 LINC02210-201ENST00000444561 288 ntBASIC6□□□□□ -1.45
GRIN3BO60391 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6□□□□□ -1.45
GRIN3BO60391 AC005229.2-201ENST00000456995 399 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AMD1P1-201ENST00000457220 922 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6□□□□□ -1.45
GRIN3BO60391 MTND5P5-201ENST00000503764 376 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AP003467.2-201ENST00000520175 319 ntBASIC6□□□□□ -1.45
GRIN3BO60391 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6□□□□□ -1.45
GRIN3BO60391 AP000790.1-201ENST00000528891 737 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6□□□□□ -1.45
GRIN3BO60391 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6□□□□□ -1.45
GRIN3BO60391 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6□□□□□ -1.45
GRIN3BO60391 HMGB1P33-201ENST00000563485 527 ntBASIC6□□□□□ -1.45
GRIN3BO60391 MIR3682-201ENST00000581338 84 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AP001180.3-201ENST00000582221 145 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6□□□□□ -1.45
GRIN3BO60391 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6□□□□□ -1.45
GRIN3BO60391 AC112230.1-201ENST00000604342 547 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AC008277.2-201ENST00000605196 797 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AL365503.1-201ENST00000605247 905 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AC091979.2-201ENST00000607514 214 ntBASIC6□□□□□ -1.45
GRIN3BO60391 UBE2Q2P2-203ENST00000613592 761 ntBASIC6□□□□□ -1.45
GRIN3BO60391 AC012150.2-201ENST00000621300 544 ntBASIC6□□□□□ -1.45
GRIN3BO60391 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
GRIN3BO60391 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6□□□□□ -1.45
GRIN3BO60391 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6□□□□□ -1.45
GRIN3BO60391 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
GRIN3BO60391 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.99□□□□□ -1.45
GRIN3BO60391 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 AC097504.1-201ENST00000515103 2415 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.99□□□□□ -1.45
GRIN3BO60391 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.99□□□□□ -1.45
GRIN3BO60391 OR11H4-201ENST00000315409 1082 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 SNORA2.3-201ENST00000383920 135 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 RNU1-13P-201ENST00000384499 162 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 Y_RNA.573-201ENST00000384763 105 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 MIR589-201ENST00000385238 99 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 SNORD115.1-201ENST00000391109 76 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 CALM2P3-201ENST00000400429 449 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC069157.1-201ENST00000421749 137 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC010881.1-201ENST00000433830 235 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.99□□□□□ -1.45
GRIN3BO60391 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.99□□□□□ -1.45
GRIN3BO60391 RPS4XP4-201ENST00000443195 763 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 PRSS3P4-201ENST00000453323 162 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.99□□□□□ -1.45
GRIN3BO60391 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.99□□□□□ -1.45
GRIN3BO60391 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.99□□□□□ -1.45
GRIN3BO60391 RPL21P6-201ENST00000479171 504 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 RPS24P16-201ENST00000497294 392 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC112204.1-201ENST00000502591 103 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.99□□□□□ -1.45
GRIN3BO60391 AC026412.2-201ENST00000512270 1075 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC098976.1-201ENST00000513014 541 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.99□□□□□ -1.45
GRIN3BO60391 RNU6-202P-201ENST00000515998 96 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 OR8Q1P-201ENST00000526467 655 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.99□□□□□ -1.45
GRIN3BO60391 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.99□□□□□ -1.45
GRIN3BO60391 RPL21P5-201ENST00000554662 472 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AL157687.1-201ENST00000554853 619 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.99□□□□□ -1.45
GRIN3BO60391 AC127024.5-201ENST00000580085 462 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.99□□□□□ -1.45
GRIN3BO60391 MIR4637-201ENST00000582405 84 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.99□□□□□ -1.45
GRIN3BO60391 AC022726.1-201ENST00000587475 207 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC115085.1-201ENST00000588924 229 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC008687.2-201ENST00000597865 520 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.99□□□□□ -1.45
GRIN3BO60391 AC008536.2-201ENST00000607284 349 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.99□□□□□ -1.45
GRIN3BO60391 AP000843.1-201ENST00000624880 701 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
GRIN3BO60391 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
GRIN3BO60391 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
GRIN3BO60391 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.99□□□□□ -1.45
GRIN3BO60391 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 AC104964.3-201ENST00000606115 2860 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 AC002525.1-201ENST00000624392 1622 ntBASIC5.99□□□□□ -1.45
GRIN3BO60391 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GRIN3BO60391 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
GRIN3BO60391 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
GRIN3BO60391 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GRIN3BO60391 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
GRIN3BO60391 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms