Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX4O60224 ZNF37BP-203ENST00000452306 1352 ntBASIC3.89□□□□□ -1.79
SSX4O60224 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX4O60224 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX4O60224 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX4O60224 AL391684.1-202ENST00000641293 1636 ntBASIC3.89□□□□□ -1.79
SSX4O60224 ZFRP1-201ENST00000457579 2970 ntBASIC3.89□□□□□ -1.79
SSX4O60224 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX4O60224 AC097504.1-201ENST00000515103 2415 ntBASIC3.89□□□□□ -1.79
SSX4O60224 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SSX4O60224 RNA5SP322-201ENST00000363617 119 ntBASIC3.89□□□□□ -1.79
SSX4O60224 OR6C69P-201ENST00000394268 893 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX4O60224 RAC1P3-201ENST00000416129 580 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX4O60224 TIMM9P2-201ENST00000419324 266 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AL356387.2-201ENST00000422272 243 ntBASIC3.89□□□□□ -1.79
SSX4O60224 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SSX4O60224 AC092427.1-201ENST00000439177 601 ntBASIC3.89□□□□□ -1.79
SSX4O60224 RPL23AP93-201ENST00000440847 484 ntBASIC3.89□□□□□ -1.79
SSX4O60224 MTCYBP11-201ENST00000447254 1109 ntBASIC3.89□□□□□ -1.79
SSX4O60224 MTND1P31-201ENST00000449206 961 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC108463.1-201ENST00000450258 347 ntBASIC3.89□□□□□ -1.79
SSX4O60224 NUTF2P7-201ENST00000453086 375 ntBASIC3.89□□□□□ -1.79
SSX4O60224 RPL18AP17-201ENST00000455326 198 ntBASIC3.89□□□□□ -1.79
SSX4O60224 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX4O60224 RPL21P103-201ENST00000479921 488 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC025164.1-201ENST00000496249 478 ntBASIC3.89□□□□□ -1.79
SSX4O60224 MTCYBP17-201ENST00000503579 789 ntBASIC3.89□□□□□ -1.79
SSX4O60224 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSX4O60224 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX4O60224 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX4O60224 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.89□□□□□ -1.79
SSX4O60224 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.89□□□□□ -1.79
SSX4O60224 SNORA31.9-201ENST00000516429 84 ntBASIC3.89□□□□□ -1.79
SSX4O60224 MIR2114-201ENST00000516645 80 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX4O60224 AP001636.2-201ENST00000525517 696 ntBASIC3.89□□□□□ -1.79
SSX4O60224 OR8L1P-201ENST00000534005 955 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.89□□□□□ -1.79
SSX4O60224 DUXAP6-201ENST00000553858 601 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC007424.1-203ENST00000554613 687 ntBASIC3.89□□□□□ -1.79
SSX4O60224 CENPUP2-201ENST00000555897 1186 ntBASIC3.89□□□□□ -1.79
SSX4O60224 MTND3P12-201ENST00000559068 328 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX4O60224 AL512347.1-201ENST00000566420 503 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX4O60224 LARP7P2-201ENST00000575306 125 ntBASIC3.89□□□□□ -1.79
SSX4O60224 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX4O60224 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.89□□□□□ -1.79
SSX4O60224 AC025946.2-201ENST00000603398 234 ntBASIC3.89□□□□□ -1.79
SSX4O60224 LLPHP1-201ENST00000603571 367 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC025588.3-201ENST00000604182 274 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AC090246.1-201ENST00000616499 426 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.89□□□□□ -1.79
SSX4O60224 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSX4O60224 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX4O60224 NMD3P1-201ENST00000439704 1488 ntBASIC3.89□□□□□ -1.79
SSX4O60224 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSX4O60224 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSX4O60224 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSX4O60224 NXPH1-205ENST00000602349 1953 ntBASIC3.89□□□□□ -1.79
SSX4O60224 AL359893.1-201ENST00000447628 1580 ntBASIC3.89□□□□□ -1.79
SSX4O60224 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX4O60224 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX4O60224 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSX4O60224 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX4O60224 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX4O60224 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SSX4O60224 AC021146.4-201ENST00000309229 279 ntBASIC3.88□□□□□ -1.79
SSX4O60224 RNU1-130P-201ENST00000363930 160 ntBASIC3.88□□□□□ -1.79
SSX4O60224 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 RNU6-1122P-201ENST00000384449 107 ntBASIC3.88□□□□□ -1.79
SSX4O60224 AC016769.3-201ENST00000396562 315 ntBASIC3.88□□□□□ -1.79
SSX4O60224 ARF4P3-201ENST00000397387 509 ntBASIC3.88□□□□□ -1.79
SSX4O60224 AF228730.1-201ENST00000397972 663 ntBASIC3.88□□□□□ -1.79
SSX4O60224 EIF5P1-201ENST00000400019 1231 ntBASIC3.88□□□□□ -1.79
SSX4O60224 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX4O60224 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX4O60224 RPL31P45-201ENST00000419532 356 ntBASIC3.88□□□□□ -1.79
SSX4O60224 AL035410.1-201ENST00000427409 427 ntBASIC3.88□□□□□ -1.79
SSX4O60224 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 RPL39P6-201ENST00000448289 150 ntBASIC3.88□□□□□ -1.79
SSX4O60224 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SSX4O60224 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX4O60224 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX4O60224 AC026402.1-201ENST00000513642 170 ntBASIC3.88□□□□□ -1.79
SSX4O60224 IGKV2D-36-201ENST00000518643 226 ntBASIC3.88□□□□□ -1.79
SSX4O60224 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.88□□□□□ -1.79
SSX4O60224 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX4O60224 DUXAP5-201ENST00000529668 529 ntBASIC3.88□□□□□ -1.79
SSX4O60224 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.88□□□□□ -1.79
SSX4O60224 ZNF321P-202ENST00000550843 495 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms