Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC016716.1-201ENST00000265882 708 ntBASIC4.64□□□□□ -1.67
PROM1O43490 RN7SKP95-201ENST00000362860 303 ntBASIC4.64□□□□□ -1.67
PROM1O43490 RNA5SP123-201ENST00000363244 119 ntBASIC4.64□□□□□ -1.67
PROM1O43490 RN7SKP226-201ENST00000364912 300 ntBASIC4.64□□□□□ -1.67
PROM1O43490 RPS3AP23-201ENST00000401762 784 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AL357515.1-201ENST00000402967 542 ntBASIC4.64□□□□□ -1.67
PROM1O43490 RNU2-28P-201ENST00000410457 189 ntBASIC4.64□□□□□ -1.67
PROM1O43490 RNA5SP345-201ENST00000410646 108 ntBASIC4.64□□□□□ -1.67
PROM1O43490 OR8F1P-201ENST00000425243 930 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 AC092162.1-201ENST00000432828 434 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.64□□□□□ -1.67
PROM1O43490 AL022238.1-201ENST00000442557 355 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 AC000111.2-201ENST00000448200 210 ntBASIC4.64□□□□□ -1.67
PROM1O43490 RPL23AP15-201ENST00000450202 459 ntBASIC4.64□□□□□ -1.67
PROM1O43490 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.64□□□□□ -1.67
PROM1O43490 SNORD42A-201ENST00000459584 64 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AC092324.1-201ENST00000468671 324 ntBASIC4.64□□□□□ -1.67
PROM1O43490 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.64□□□□□ -1.67
PROM1O43490 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.64□□□□□ -1.67
PROM1O43490 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.64□□□□□ -1.67
PROM1O43490 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.64□□□□□ -1.67
PROM1O43490 AC090686.1-201ENST00000481577 749 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.64□□□□□ -1.67
PROM1O43490 ENPP7P9-201ENST00000514456 627 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 RNU6-150P-201ENST00000516237 95 ntBASIC4.64□□□□□ -1.67
PROM1O43490 RNA5SP392-201ENST00000516905 112 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.64□□□□□ -1.67
PROM1O43490 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.64□□□□□ -1.67
PROM1O43490 AC063949.1-201ENST00000552900 865 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.64□□□□□ -1.67
PROM1O43490 AC141257.3-201ENST00000572906 215 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AC011477.5-201ENST00000586571 259 ntBASIC4.64□□□□□ -1.67
PROM1O43490 BNIP3P23-201ENST00000599655 511 ntBASIC4.64□□□□□ -1.67
PROM1O43490 RNF138P2-201ENST00000603490 592 ntBASIC4.64□□□□□ -1.67
PROM1O43490 PRELID3BP8-201ENST00000604148 295 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AL022154.1-201ENST00000604698 785 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AP000860.1-201ENST00000605250 559 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AC091834.1-201ENST00000614543 472 ntBASIC4.64□□□□□ -1.67
PROM1O43490 AC093591.3-201ENST00000634516 308 ntBASIC4.64□□□□□ -1.67
PROM1O43490 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PROM1O43490 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.64□□□□□ -1.67
PROM1O43490 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 DCAF13P1-201ENST00000495256 1330 ntBASIC4.64□□□□□ -1.67
PROM1O43490 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PROM1O43490 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
PROM1O43490 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 AC015813.6-201ENST00000624409 5808 ntBASIC4.64□□□□□ -1.67
PROM1O43490 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PROM1O43490 CR848007.1-201ENST00000442354 1699 ntBASIC4.64□□□□□ -1.67
PROM1O43490 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PROM1O43490 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.63□□□□□ -1.67
PROM1O43490 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 AC008758.3-201ENST00000507003 1829 ntBASIC4.63□□□□□ -1.67
PROM1O43490 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.63□□□□□ -1.67
PROM1O43490 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
PROM1O43490 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 RN7SKP104-201ENST00000362605 328 ntBASIC4.63□□□□□ -1.67
PROM1O43490 RNU6-984P-201ENST00000363236 109 ntBASIC4.63□□□□□ -1.67
PROM1O43490 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 RNU6-657P-201ENST00000383904 107 ntBASIC4.63□□□□□ -1.67
PROM1O43490 Y_RNA.554-201ENST00000384672 102 ntBASIC4.63□□□□□ -1.67
PROM1O43490 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 SNRPEP2-201ENST00000397592 279 ntBASIC4.63□□□□□ -1.67
PROM1O43490 RPS24P12-201ENST00000402084 394 ntBASIC4.63□□□□□ -1.67
PROM1O43490 SNORA11-201ENST00000408789 128 ntBASIC4.63□□□□□ -1.67
PROM1O43490 TBCAP2-201ENST00000416175 326 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.63□□□□□ -1.67
PROM1O43490 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.63□□□□□ -1.67
PROM1O43490 USP9YP9-201ENST00000429406 715 ntBASIC4.63□□□□□ -1.67
PROM1O43490 ZYG11AP1-201ENST00000430329 837 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC091390.1-201ENST00000433904 331 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PROM1O43490 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.63□□□□□ -1.67
PROM1O43490 AC092427.1-201ENST00000439177 601 ntBASIC4.63□□□□□ -1.67
PROM1O43490 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.63□□□□□ -1.67
PROM1O43490 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.63□□□□□ -1.67
PROM1O43490 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.63□□□□□ -1.67
PROM1O43490 SNRPFP4-201ENST00000456366 242 ntBASIC4.63□□□□□ -1.67
PROM1O43490 RPS15AP1-201ENST00000457423 391 ntBASIC4.63□□□□□ -1.67
PROM1O43490 snoU13.20-201ENST00000459180 104 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms