Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL353743.1-202ENST00000431724 1695 ntBASIC2.56□□□□□ -2
TCRBV4S1A1TA0A5B7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
TCRBV4S1A1TA0A5B7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 RNU1-70P-201ENST00000362618 164 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 Y_RNA.62-201ENST00000362840 99 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 DYNLT3P1-201ENST00000378574 347 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 SNORA48.5-201ENST00000391143 135 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC240504.1-201ENST00000395709 845 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 RNA5SP229-201ENST00000410809 99 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 OR4K6P-201ENST00000416478 897 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 GABPAP-201ENST00000419271 1356 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 RPL7P44-201ENST00000424827 742 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 ZNF833P-201ENST00000424938 1494 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 NEK4P1-201ENST00000433383 879 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AL671855.1-201ENST00000446875 1203 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 MTCYBP14-201ENST00000457471 715 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AP000873.1-201ENST00000463987 400 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC109925.1-201ENST00000478069 331 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 RPS3AP43-201ENST00000479743 781 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 RPL7P23-201ENST00000493874 747 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC091152.2-201ENST00000591628 2569 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AF131215.7-201ENST00000602443 707 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC010680.4-201ENST00000605334 543 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AP003072.4-201ENST00000624580 310 ntBASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TCRBV4S1A1TA0A5B7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 RNA5SP374-201ENST00000362939 125 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 MIR634-201ENST00000385208 97 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 RPL21P3-201ENST00000395517 478 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 HSFY1P1-201ENST00000423928 1178 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC009965.2-201ENST00000425328 970 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 OR2AS1P-201ENST00000427827 319 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 OR2B8P-201ENST00000432841 938 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC006994.1-201ENST00000438212 839 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 ATP5C1P1-201ENST00000441945 895 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 HMGB3P6-201ENST00000444896 598 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 Z75741.1-201ENST00000446793 314 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC146507.2-201ENST00000460608 476 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AP001992.1-205ENST00000462248 379 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC012170.1-201ENST00000495139 359 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC010265.1-201ENST00000513509 211 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 Vault.1-201ENST00000516474 102 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 MIR5004-201ENST00000579078 107 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC067852.4-201ENST00000590314 478 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 VN1R92P-201ENST00000598511 928 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AC009464.1-201ENST00000615731 469 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 uc_338.9-201ENST00000617424 182 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 RMST_5.1-201ENST00000618704 126 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 AL079305.1-201ENST00000623159 3008 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 MTND5P24-201ENST00000438892 1767 ntBASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.54□□□□□ -2
TCRBV4S1A1TA0A5B7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
TCRBV4S1A1TA0A5B7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.53□□□□□ -2
TCRBV4S1A1TA0A5B7 AC021755.1-201ENST00000559747 1447 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms