Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 AL161901.1-201ENST00000624954 3425 ntBASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB11Q9Y5F2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AC011755.1-201ENST00000623763 2049 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-1050P-201ENST00000410388 107 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 RPL30P2-201ENST00000414021 291 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 BX682237.1-201ENST00000415016 335 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AC092162.1-201ENST00000432828 434 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 SNX18P26-201ENST00000458433 740 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 snoU13.7-201ENST00000459220 104 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AC104164.1-201ENST00000460282 590 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 COX7A2P2-201ENST00000505291 250 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-470P-201ENST00000515954 104 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-1092P-201ENST00000516955 87 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AP000827.1-201ENST00000527814 258 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 MIR4675-201ENST00000577898 77 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 MIR4293-201ENST00000584305 78 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 U2.1-201ENST00000618978 145 ntBASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB11Q9Y5F2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 RNA5SP478-201ENST00000364657 115 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 RNU6-1109P-201ENST00000391187 107 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.594-201ENST00000410373 140 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 RNA5SP107-201ENST00000411358 122 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 HMGN1P20-201ENST00000411849 300 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 RPS29P14-201ENST00000431518 171 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC092013.1-201ENST00000438795 332 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC005094.1-201ENST00000440420 368 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 DNAJC19P5-201ENST00000443295 316 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 RPS24P6-201ENST00000452670 400 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 DYNLL1P5-201ENST00000467158 270 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 RN7SL643P-201ENST00000471845 291 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 RN7SL714P-201ENST00000487050 298 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 RPL22P13-201ENST00000493291 347 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 HIGD1AP14-201ENST00000507617 282 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC108078.2-201ENST00000510750 236 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 Y_RNA.670-201ENST00000516255 105 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 IGHV4-55-201ENST00000520889 368 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC090115.3-201ENST00000553218 849 ntBASIC6.16□□□□□ -1.42
PCDHB11Q9Y5F2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms