Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RN7SKP74-201ENST00000362849 309 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 RNU6-353P-201ENST00000364266 108 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 PRRC2CP1-201ENST00000404428 159 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AC087650.1-201ENST00000431445 468 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AC233982.1-201ENST00000451247 436 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 BTF3P5-201ENST00000457252 467 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AC015724.1-201ENST00000478577 156 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AC025518.1-201ENST00000479856 347 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 RNU6-416P-201ENST00000516265 103 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 IGHV3-32-201ENST00000519182 355 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AC034105.3-201ENST00000565294 442 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 MIR6864-201ENST00000617935 70 ntBASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC6.97□□□□□ -1.29
SHROOM4Q9ULL8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SHROOM4Q9ULL8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SHROOM4Q9ULL8 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 SNORA38.1-201ENST00000364172 131 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 RN7SKP111-201ENST00000410349 271 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 AC004022.2-201ENST00000413824 193 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 AC234064.1-201ENST00000436312 247 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 TPTE2P3-201ENST00000441562 1189 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 HMGB3P9-201ENST00000441799 583 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 HMGB1P38-201ENST00000490557 577 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 AC104417.1-201ENST00000523974 751 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 Z82195.1-201ENST00000604558 398 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 AL359535.1-201ENST00000612100 1087 ntBASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.96□□□□□ -1.3
SHROOM4Q9ULL8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 MTCYBP15-201ENST00000433123 1127 ntBASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 RPL23AP15-201ENST00000450202 459 ntBASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 PDCD5P1-201ENST00000543528 309 ntBASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 ZNF971P-201ENST00000562068 1249 ntBASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 AL353600.1-201ENST00000608148 251 ntBASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 BX649567.1-201ENST00000642071 1134 ntBASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC6.95□□□□□ -1.3
SHROOM4Q9ULL8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 GNG5P1-201ENST00000255500 204 ntBASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 RNU1-108P-201ENST00000362556 161 ntBASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 OR5H4P-201ENST00000510851 923 ntBASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 AC019227.1-201ENST00000526902 510 ntBASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 NIFKP8-201ENST00000560500 874 ntBASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 RPAP2P1-201ENST00000603626 1168 ntBASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SHROOM4Q9ULL8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 RNU6-298P-201ENST00000390888 96 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 TMSB4XP8-201ENST00000402089 135 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 TMSB4XP6-201ENST00000415187 135 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 TMSB4XP1-201ENST00000424567 135 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 AC093663.1-201ENST00000497190 394 ntBASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.93□□□□□ -1.3
SHROOM4Q9ULL8 RNU6-488P-201ENST00000515918 99 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms