Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL024507.1-201ENST00000412741 274 ntBASIC2.92□□□□□ -1.94
CCDC88CQ9P219 RPL27AP5-201ENST00000469428 449 ntBASIC2.92□□□□□ -1.94
CCDC88CQ9P219 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC88CQ9P219 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC88CQ9P219 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC88CQ9P219 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.92□□□□□ -1.94
CCDC88CQ9P219 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.92□□□□□ -1.94
CCDC88CQ9P219 AC005242.1-201ENST00000585658 438 ntBASIC2.92□□□□□ -1.94
CCDC88CQ9P219 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC88CQ9P219 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 ZNF826P-207ENST00000622273 1910 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AC062016.1-201ENST00000355719 319 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AC093719.1-202ENST00000392735 373 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AL031679.1-201ENST00000400616 525 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AC236972.1-201ENST00000433225 199 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AC096576.1-201ENST00000489014 359 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 TXNP6-201ENST00000510190 310 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AL137843.1-201ENST00000605078 385 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 CYCSP41-201ENST00000616920 296 ntBASIC2.91□□□□□ -1.94
CCDC88CQ9P219 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC88CQ9P219 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC88CQ9P219 AL672296.1-201ENST00000427780 2158 ntBASIC2.9□□□□□ -1.94
CCDC88CQ9P219 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.9□□□□□ -1.94
CCDC88CQ9P219 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC88CQ9P219 RNU6-225P-201ENST00000384613 103 ntBASIC2.9□□□□□ -1.94
CCDC88CQ9P219 CACYBPP1-201ENST00000438592 684 ntBASIC2.9□□□□□ -1.94
CCDC88CQ9P219 AL035404.1-201ENST00000497982 568 ntBASIC2.9□□□□□ -1.94
CCDC88CQ9P219 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CCDC88CQ9P219 AC009812.2-201ENST00000517657 457 ntBASIC2.9□□□□□ -1.94
CCDC88CQ9P219 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.9□□□□□ -1.94
CCDC88CQ9P219 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.9□□□□□ -1.94
CCDC88CQ9P219 ZNF807-201ENST00000328088 1707 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 Y_RNA.62-201ENST00000362840 99 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC88CQ9P219 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC88CQ9P219 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC88CQ9P219 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC88CQ9P219 RAB9AP5-201ENST00000437794 597 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 AC006028.1-201ENST00000438379 402 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 RAB9AP2-201ENST00000443911 597 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC88CQ9P219 RPS17P11-201ENST00000474297 293 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 HMGB1P3-201ENST00000502802 616 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 GMPSP1-201ENST00000514075 579 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC88CQ9P219 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC88CQ9P219 VN1R90P-201ENST00000595717 726 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 BNIP3P11-201ENST00000603878 563 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 AC124312.4-201ENST00000605533 310 ntBASIC2.9□□□□□ -1.95
CCDC88CQ9P219 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC88CQ9P219 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AC093831.2-201ENST00000624393 3427 ntBASIC2.89□□□□□ -1.95
CCDC88CQ9P219 RNU6-697P-201ENST00000363348 107 ntBASIC2.89□□□□□ -1.95
CCDC88CQ9P219 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AC245054.2-201ENST00000415639 319 ntBASIC2.89□□□□□ -1.95
CCDC88CQ9P219 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 ELOCP10-201ENST00000440624 327 ntBASIC2.89□□□□□ -1.95
CCDC88CQ9P219 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AL049830.2-201ENST00000480072 201 ntBASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 ELOCP34-201ENST00000604436 327 ntBASIC2.89□□□□□ -1.95
CCDC88CQ9P219 U6.98-201ENST00000637157 84 ntBASIC2.89□□□□□ -1.95
CCDC88CQ9P219 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
CCDC88CQ9P219 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC88CQ9P219 ASNSP3-201ENST00000451989 1306 ntBASIC2.88□□□□□ -1.95
CCDC88CQ9P219 RNU4-7P-201ENST00000364758 141 ntBASIC2.88□□□□□ -1.95
CCDC88CQ9P219 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms