Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 RPL23AP22-201ENST00000437556 453 ntBASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 AC004801.2-202ENST00000463559 283 ntBASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 OR5H3P-201ENST00000502817 919 ntBASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 AC107016.2-201ENST00000547968 190 ntBASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 AL365503.1-201ENST00000605247 905 ntBASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 AL590808.1-201ENST00000618696 141 ntBASIC3.88□□□□□ -1.79
PHRF1Q9P1Y6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 MAPK10-362ENST00000641864 4484 ntBASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 U3.11-201ENST00000364476 212 ntBASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 RSL24D1P4-201ENST00000400938 484 ntBASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 HMGB3P6-201ENST00000444896 598 ntBASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 AC104687.1-201ENST00000485829 412 ntBASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.87□□□□□ -1.79
PHRF1Q9P1Y6 SNORA70B-201ENST00000384210 135 ntBASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 RN7SKP58-201ENST00000411010 305 ntBASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 RPS7P13-201ENST00000413955 498 ntBASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 RPL32P35-201ENST00000415214 394 ntBASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 AP000916.1-201ENST00000533869 835 ntBASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 AL049555.1-201ENST00000562834 1933 ntBASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PHRF1Q9P1Y6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 RPL31P12-201ENST00000422587 358 ntBASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 AP000936.2-201ENST00000447151 681 ntBASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 EEF1B2P7-201ENST00000451177 676 ntBASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 HSPE1P6-201ENST00000479457 291 ntBASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 MIR4524B-201ENST00000581569 115 ntBASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 VN1R78P-201ENST00000597393 564 ntBASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.85□□□□□ -1.79
PHRF1Q9P1Y6 SNORD56.3-201ENST00000363507 71 ntBASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 UBL5P3-201ENST00000475112 231 ntBASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 SNORA31.21-201ENST00000517180 77 ntBASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PHRF1Q9P1Y6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 MIR887-201ENST00000401258 79 ntBASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 RPS12P23-201ENST00000419579 400 ntBASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 AL162389.1-201ENST00000449233 177 ntBASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 AC007954.1-201ENST00000554198 494 ntBASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 AC008121.2-201ENST00000614647 523 ntBASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PHRF1Q9P1Y6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 RNU1-87P-201ENST00000363727 170 ntBASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 SNORA46-201ENST00000384762 135 ntBASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 AL360182.1-201ENST00000397433 468 ntBASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 AL513328.1-201ENST00000446460 224 ntBASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 MIR4644-201ENST00000579929 84 ntBASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 AC006840.1-201ENST00000623069 542 ntBASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PHRF1Q9P1Y6 AC009313.2-201ENST00000417893 1941 ntBASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PHRF1Q9P1Y6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms