Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RN7SL802P-201ENST00000577858 299 ntBASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 AC090525.3-201ENST00000605601 189 ntBASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 AL356274.1-201ENST00000617064 410 ntBASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 AC010338.1-201ENST00000621823 717 ntBASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 AC116563.2-201ENST00000624751 535 ntBASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 DDX18P4-201ENST00000511690 1966 ntBASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.42□□□□□ -1.54
BCAS3Q9H6U6 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 U8.14-201ENST00000390843 143 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 RNU1-82P-201ENST00000390851 165 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 SNORD115.1-201ENST00000391109 76 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AL356057.2-201ENST00000403318 432 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 Y_RNA.608-201ENST00000410647 95 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC114755.2-201ENST00000413520 361 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC013429.2-201ENST00000418798 781 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AL513174.1-201ENST00000423182 629 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC016712.1-201ENST00000431088 378 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AL451074.3-201ENST00000437709 472 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 CACYBPP1-201ENST00000438592 684 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 BX322784.1-201ENST00000455793 1077 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 RN7SL385P-201ENST00000468873 276 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 RPS3AP14-201ENST00000483907 780 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC012170.1-201ENST00000495139 359 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC006499.2-201ENST00000513470 337 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 Y_RNA.693-201ENST00000516641 110 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AP003034.1-201ENST00000534621 422 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 CBX3P5-201ENST00000552017 521 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 MIR3682-201ENST00000581338 84 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 RN7SL690P-201ENST00000582087 240 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AL121932.1-201ENST00000605542 214 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 PART1_1.1-201ENST00000611761 217 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 BX005214.3-202ENST00000619809 325 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC006065.6-201ENST00000625201 545 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AC006378.2-201ENST00000623178 2476 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 AL121839.2-201ENST00000565058 6943 ntBASIC5.41□□□□□ -1.54
BCAS3Q9H6U6 TLK1P1-201ENST00000456760 2440 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AC083843.2-201ENST00000568248 6253 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AP000473.2-201ENST00000602659 1537 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 SNORA70F-201ENST00000384142 135 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AL590290.1-201ENST00000405336 380 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AL356776.1-201ENST00000406574 447 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AC073264.1-201ENST00000411508 416 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AC017078.1-201ENST00000416146 368 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 BX510359.2-201ENST00000417920 305 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 HMGB3P20-201ENST00000417997 600 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 USP9YP27-201ENST00000418455 438 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 PIGFP2-201ENST00000421400 651 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 TPT1P12-201ENST00000448968 492 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 RPS5P7-201ENST00000456664 608 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 RN7SL558P-201ENST00000497468 299 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 AC111000.3-201ENST00000508057 576 ntBASIC5.4□□□□□ -1.54
BCAS3Q9H6U6 POU5F1P7-201ENST00000508759 541 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms