Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 FAM92A1P1-201ENST00000528023 890 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 BRD9P1-201ENST00000529855 560 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 OR4P1P-201ENST00000530808 1136 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 IGBP1P1-201ENST00000554337 1009 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC044860.2-201ENST00000561005 179 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC099489.2-201ENST00000574976 260 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 MIR4458-201ENST00000578872 75 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AL133173.2-201ENST00000614270 90 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 MIR6730-201ENST00000622213 67 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 LRRC77P-213ENST00000637727 880 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC073869.8-201ENST00000641806 335 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 AC004817.4-201ENST00000602396 3625 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 SOCS5P3-201ENST00000425115 1576 ntBASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TRIM55Q9BYV6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 RNA5SP30-201ENST00000365552 115 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 MIR153-1-201ENST00000384914 90 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 CALM2P3-201ENST00000400429 449 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AL049693.1-201ENST00000402760 611 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 CIR1P3-201ENST00000405137 479 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC013429.2-201ENST00000418798 781 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC092832.1-201ENST00000422934 400 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC007161.1-204ENST00000423039 460 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 FCF1P1-201ENST00000432690 571 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 PTMAP6-201ENST00000439110 327 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC005297.1-201ENST00000444765 862 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 SNORD121B-201ENST00000458838 81 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 RN7SL610P-201ENST00000463845 291 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 RN7SL189P-201ENST00000468631 289 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 RPL5P22-201ENST00000480199 884 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 RPS24P16-201ENST00000497294 392 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 TMEM248P1-201ENST00000510579 951 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC010493.1-201ENST00000513479 292 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 Vault.3-201ENST00000516676 95 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 MRPS16P1-201ENST00000523462 412 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AP001893.2-201ENST00000526949 202 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AP003385.6-201ENST00000531603 374 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 HAUS8P1-201ENST00000549005 542 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AL845331.3-202ENST00000562856 261 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AL669831.4-202ENST00000590817 238 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 IMMP1LP3-201ENST00000604197 224 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 MIR98-201ENST00000606724 119 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AC090527.3-201ENST00000619041 548 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AL356321.1-201ENST00000621360 228 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 AP003400.3-201ENST00000624904 346 ntBASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM55Q9BYV6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.4□□□□□ -1.55
TRIM55Q9BYV6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TRIM55Q9BYV6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.4□□□□□ -1.55
TRIM55Q9BYV6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms