Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 PTP4A1P6-201ENST00000531034 478 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUP88Q99567 AL133457.1-201ENST00000564251 987 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 ACTR3BP3-201ENST00000565577 979 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 MTCYBP33-201ENST00000575007 1130 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP88Q99567 MIR5186-201ENST00000577504 120 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 MIR4637-201ENST00000582405 84 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP88Q99567 AC040904.1-201ENST00000590850 223 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 AC113403.1-201ENST00000604910 193 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 Z69908.1-201ENST00000622603 247 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 AL356266.1-201ENST00000623311 483 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 AC139792.2-201ENST00000624218 587 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.15□□□□□ -1.59
NUP88Q99567 AC092192.1-201ENST00000633154 1018 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 U6.101-201ENST00000637707 76 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 FAM157B-203ENST00000639350 358 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.15□□□□□ -1.59
NUP88Q99567 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUP88Q99567 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NUP88Q99567 MAPK10-349ENST00000641767 3661 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 AP001273.1-201ENST00000624493 3152 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.15□□□□□ -1.59
NUP88Q99567 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NUP88Q99567 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.15□□□□□ -1.59
NUP88Q99567 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUP88Q99567 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.15□□□□□ -1.59
NUP88Q99567 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NUP88Q99567 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP88Q99567 RNA5SP151-201ENST00000365632 117 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NUP88Q99567 MT-TH-201ENST00000387441 69 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 MIR921-201ENST00000401133 56 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 MIR1193-201ENST00000408109 78 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AC009237.10-201ENST00000414112 510 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AC083875.1-201ENST00000419509 405 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP88Q99567 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP88Q99567 AC008065.1-201ENST00000428525 348 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP88Q99567 UBE2V1P3-201ENST00000439651 417 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 RPL7L1P1-201ENST00000448259 785 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP88Q99567 AC005008.1-201ENST00000456151 612 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP88Q99567 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AC091167.1-201ENST00000492017 396 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 OR2A20P-203ENST00000498397 1268 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.14□□□□□ -1.59
NUP88Q99567 MRPL49P2-201ENST00000521066 465 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.14□□□□□ -1.59
NUP88Q99567 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.14□□□□□ -1.59
NUP88Q99567 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NUP88Q99567 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.14□□□□□ -1.59
NUP88Q99567 AC068446.3-201ENST00000555285 382 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP88Q99567 RN7SL176P-201ENST00000580352 264 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP88Q99567 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP88Q99567 AC020914.6-201ENST00000594327 272 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.14□□□□□ -1.59
NUP88Q99567 IPO5P1-202ENST00000600039 287 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 WISP1-OT1-201ENST00000602893 642 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 MTCYBP22-201ENST00000603788 447 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AC113194.1-201ENST00000606037 500 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AC135507.1-201ENST00000607214 561 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.14□□□□□ -1.59
NUP88Q99567 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP88Q99567 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.14□□□□□ -1.59
NUP88Q99567 AL356596.1-201ENST00000624230 379 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 EOGT-210ENST00000615922 1931 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.14□□□□□ -1.59
NUP88Q99567 NXPH1-205ENST00000602349 1953 ntBASIC5.14□□□□□ -1.59
NUP88Q99567 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NUP88Q99567 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP88Q99567 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP88Q99567 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.13□□□□□ -1.59
NUP88Q99567 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
NUP88Q99567 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP88Q99567 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NUP88Q99567 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NUP88Q99567 RNU1-20P-201ENST00000363314 162 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 RNU5F-7P-201ENST00000363696 115 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 RNU6-660P-201ENST00000364566 109 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 SNORA51.6-201ENST00000384151 125 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NUP88Q99567 AC016769.3-201ENST00000396562 315 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 BTBD10P2-201ENST00000404779 676 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 SNORA11-201ENST00000408789 128 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 RPS20P14-201ENST00000412545 360 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.13□□□□□ -1.59
NUP88Q99567 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP88Q99567 OR4F13P-201ENST00000428478 931 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.13□□□□□ -1.59
NUP88Q99567 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NUP88Q99567 AL831737.1-201ENST00000441288 271 ntBASIC5.13□□□□□ -1.59
NUP88Q99567 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.13□□□□□ -1.59
NUP88Q99567 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms