Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.79□□□□□ -1.32
TRIM47Q96LD4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 Y_RNA.14-201ENST00000362415 103 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 RNU6-1339P-201ENST00000363574 91 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 MIR223-201ENST00000385204 110 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 RNU6-101P-201ENST00000410323 104 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 RNU6-193P-201ENST00000410977 107 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC092745.2-202ENST00000411880 369 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AL450992.3-201ENST00000413192 568 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 NMD3P2-201ENST00000421815 761 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AL158073.1-201ENST00000426848 1104 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AL139148.1-201ENST00000427122 680 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AL445928.1-201ENST00000435545 222 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 OSTCP8-201ENST00000445117 448 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 MTCO1P27-201ENST00000448269 226 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 RPL21P99-201ENST00000480369 423 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC022215.1-201ENST00000481770 362 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC058823.1-201ENST00000485315 474 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC011005.2-201ENST00000487324 359 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 RN7SL808P-201ENST00000496066 299 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 RNU6-583P-201ENST00000516012 92 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AL512329.2-201ENST00000607350 548 ntBASIC6.78□□□□□ -1.32
TRIM47Q96LD4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM47Q96LD4 AC090220.1-201ENST00000593078 1699 ntBASIC6.77□□□□□ -1.32
TRIM47Q96LD4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
TRIM47Q96LD4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 LINC00561-201ENST00000565815 2738 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 RNA5SP507-201ENST00000363603 121 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 RNU6-777P-201ENST00000364265 104 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 RNU6-108P-201ENST00000365558 107 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 SNORA20.2-201ENST00000383922 131 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 Y_RNA.530-201ENST00000384587 101 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AL139397.2-201ENST00000404529 772 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 MIR320C1-201ENST00000408566 88 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 RN7SKP125-201ENST00000410481 302 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 RPL23AP30-201ENST00000432419 501 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 RPL12P3-201ENST00000440080 396 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 MTND4LP30-201ENST00000454092 297 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AC005008.1-201ENST00000456151 612 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 RN7SL352P-201ENST00000466002 277 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AC004453.1-201ENST00000487895 408 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 RNU6-150P-201ENST00000516237 95 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AC068831.4-201ENST00000556118 109 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AL355297.3-201ENST00000604082 446 ntBASIC6.77□□□□□ -1.33
TRIM47Q96LD4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
TRIM47Q96LD4 AL161756.3-201ENST00000641216 2071 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms