Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AF228730.2-201ENST00000438784 848 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AL356535.1-201ENST00000440335 398 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 MTND2P20-201ENST00000440805 661 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 PHBP16-201ENST00000446318 950 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 ZNF886P-201ENST00000450781 723 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 RPS24P6-201ENST00000452670 400 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 snoU109.4-201ENST00000458953 143 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC018638.3-201ENST00000461273 132 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC069499.1-201ENST00000489433 509 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AP001086.1-201ENST00000494882 321 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 RPL31P61-201ENST00000496160 376 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 HMGB1P22-201ENST00000505315 124 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 RNA5SP519-201ENST00000516480 119 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 RNA5SP73-201ENST00000516744 108 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 TRAV8-5-201ENST00000537369 341 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC079171.1-201ENST00000568788 914 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 RPL12P25-202ENST00000598100 674 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC244505.7-201ENST00000599675 272 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC016597.2-201ENST00000613256 341 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC006963.1-201ENST00000624003 1052 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 Z82217.1-201ENST00000625157 8149 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC244517.1-201ENST00000606030 2086 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC079741.1-201ENST00000321498 212 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 SNRPEP3-201ENST00000338402 276 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 RNU1-14P-201ENST00000362759 152 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 RNU6-560P-201ENST00000364007 108 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 RNU6-629P-201ENST00000384061 103 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 MIR129-1-201ENST00000384972 72 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 HSPE1P26-201ENST00000405341 275 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AL450338.1-201ENST00000407987 512 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 MTCO2P8-201ENST00000412213 658 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 TOMM22P1-201ENST00000418578 312 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC011742.1-201ENST00000431448 434 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC011998.1-201ENST00000433403 117 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 SLC31A1P1-201ENST00000451221 567 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 RN7SL98P-201ENST00000462271 300 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC109327.1-201ENST00000471666 403 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AF213884.1-201ENST00000488102 463 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC109458.1-201ENST00000508858 316 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 USP9YP5-201ENST00000511770 630 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 EEF1B2P4-201ENST00000551398 348 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AADACP1-206ENST00000561502 1193 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 RPL23AP87-202ENST00000573039 466 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC015688.2-201ENST00000584523 262 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC069304.2-201ENST00000605154 435 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AC128687.1-201ENST00000605304 619 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 AL157392.4-201ENST00000609756 345 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 RN7SL722P-201ENST00000617780 284 ntBASIC3.95□□□□□ -1.78
VPS33AQ96AX1 RN7SL565P-201ENST00000618246 284 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms