Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TOPBP1Q92547 U8.2-201ENST00000363156 134 ntBASIC4.69□□□□□ -1.66
TOPBP1Q92547 RPS4XP7-201ENST00000406274 780 ntBASIC4.69□□□□□ -1.66
TOPBP1Q92547 RPL7P10-201ENST00000417407 739 ntBASIC4.69□□□□□ -1.66
TOPBP1Q92547 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.69□□□□□ -1.66
TOPBP1Q92547 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.69□□□□□ -1.66
TOPBP1Q92547 AC011602.1-201ENST00000546484 331 ntBASIC4.69□□□□□ -1.66
TOPBP1Q92547 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.69□□□□□ -1.66
TOPBP1Q92547 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.69□□□□□ -1.66
TOPBP1Q92547 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.69□□□□□ -1.66
TOPBP1Q92547 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TOPBP1Q92547 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOPBP1Q92547 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOPBP1Q92547 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TOPBP1Q92547 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TOPBP1Q92547 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOPBP1Q92547 ATF1P1-201ENST00000406040 927 ntBASIC4.68□□□□□ -1.66
TOPBP1Q92547 SSR1P1-201ENST00000407630 814 ntBASIC4.68□□□□□ -1.66
TOPBP1Q92547 RAP1BP1-201ENST00000412709 553 ntBASIC4.68□□□□□ -1.66
TOPBP1Q92547 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TOPBP1Q92547 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.68□□□□□ -1.66
TOPBP1Q92547 snoU13.23-201ENST00000458863 104 ntBASIC4.68□□□□□ -1.66
TOPBP1Q92547 AC010401.1-201ENST00000463867 348 ntBASIC4.68□□□□□ -1.66
TOPBP1Q92547 AC126121.1-201ENST00000482313 553 ntBASIC4.68□□□□□ -1.66
TOPBP1Q92547 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.68□□□□□ -1.66
TOPBP1Q92547 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOPBP1Q92547 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOPBP1Q92547 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOPBP1Q92547 AC008725.1-201ENST00000605123 2263 ntBASIC4.68□□□□□ -1.66
TOPBP1Q92547 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TOPBP1Q92547 AC005332.5-201ENST00000591222 2919 ntBASIC4.68□□□□□ -1.66
TOPBP1Q92547 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOPBP1Q92547 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 MTCO1P52-201ENST00000433928 531 ntBASIC4.67□□□□□ -1.66
TOPBP1Q92547 HMGB3P6-201ENST00000444896 598 ntBASIC4.67□□□□□ -1.66
TOPBP1Q92547 AC099063.2-201ENST00000446360 662 ntBASIC4.67□□□□□ -1.66
TOPBP1Q92547 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TOPBP1Q92547 RNA5SP282-201ENST00000516355 108 ntBASIC4.67□□□□□ -1.66
TOPBP1Q92547 RN7SKP283-201ENST00000517197 270 ntBASIC4.67□□□□□ -1.66
TOPBP1Q92547 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 AL591516.1-201ENST00000611326 274 ntBASIC4.67□□□□□ -1.66
TOPBP1Q92547 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOPBP1Q92547 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TOPBP1Q92547 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TOPBP1Q92547 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TOPBP1Q92547 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 AL513477.1-202ENST00000417061 214 ntBASIC4.67□□□□□ -1.66
TOPBP1Q92547 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 RPS20P22-201ENST00000473700 357 ntBASIC4.67□□□□□ -1.66
TOPBP1Q92547 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 RNU6-991P-201ENST00000516168 107 ntBASIC4.67□□□□□ -1.66
TOPBP1Q92547 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.67□□□□□ -1.66
TOPBP1Q92547 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TOPBP1Q92547 AL049555.1-201ENST00000562834 1933 ntBASIC4.66□□□□□ -1.66
TOPBP1Q92547 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TOPBP1Q92547 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TOPBP1Q92547 RNU6-304P-201ENST00000364855 107 ntBASIC4.66□□□□□ -1.66
TOPBP1Q92547 AL049610.1-201ENST00000423374 372 ntBASIC4.66□□□□□ -1.66
TOPBP1Q92547 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TOPBP1Q92547 AP002770.2-201ENST00000543613 532 ntBASIC4.66□□□□□ -1.66
TOPBP1Q92547 AC090312.2-201ENST00000582687 378 ntBASIC4.66□□□□□ -1.66
TOPBP1Q92547 DNAJC19P3-201ENST00000594491 331 ntBASIC4.66□□□□□ -1.66
TOPBP1Q92547 AC241585.2-209ENST00000638217 143 ntBASIC4.66□□□□□ -1.66
TOPBP1Q92547 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.65□□□□□ -1.66
TOPBP1Q92547 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TOPBP1Q92547 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TOPBP1Q92547 TAB3P1-202ENST00000452645 1634 ntBASIC4.65□□□□□ -1.66
TOPBP1Q92547 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.65□□□□□ -1.67
TOPBP1Q92547 RN7SKP223-201ENST00000410582 62 ntBASIC4.65□□□□□ -1.67
TOPBP1Q92547 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.65□□□□□ -1.67
TOPBP1Q92547 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.65□□□□□ -1.67
TOPBP1Q92547 BX276092.3-201ENST00000424182 230 ntBASIC4.65□□□□□ -1.67
TOPBP1Q92547 AC005189.1-201ENST00000431286 310 ntBASIC4.65□□□□□ -1.67
TOPBP1Q92547 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.65□□□□□ -1.67
TOPBP1Q92547 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TOPBP1Q92547 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.65□□□□□ -1.67
TOPBP1Q92547 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TOPBP1Q92547 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.65□□□□□ -1.67
TOPBP1Q92547 AC092079.1-201ENST00000558620 1985 ntBASIC4.65□□□□□ -1.67
TOPBP1Q92547 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.65□□□□□ -1.67
TOPBP1Q92547 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TOPBP1Q92547 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.64□□□□□ -1.67
TOPBP1Q92547 AC012020.1-201ENST00000624541 1728 ntBASIC4.64□□□□□ -1.67
TOPBP1Q92547 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TOPBP1Q92547 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.64□□□□□ -1.67
TOPBP1Q92547 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.64□□□□□ -1.67
TOPBP1Q92547 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.64□□□□□ -1.67
TOPBP1Q92547 AC022882.1-201ENST00000532142 501 ntBASIC4.64□□□□□ -1.67
TOPBP1Q92547 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.64□□□□□ -1.67
TOPBP1Q92547 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.64□□□□□ -1.67
TOPBP1Q92547 CTSLP2-204ENST00000629029 392 ntBASIC4.64□□□□□ -1.67
TOPBP1Q92547 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.64□□□□□ -1.67
TOPBP1Q92547 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TOPBP1Q92547 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
TOPBP1Q92547 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms