Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC092647.1-201ENST00000420654 287 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 RPS3AP44-201ENST00000425466 790 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 ARPC3P2-201ENST00000457786 533 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 VN1R105P-201ENST00000486595 910 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 RPS4XP15-201ENST00000489210 795 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 RN7SL558P-201ENST00000497468 299 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 PCMTD1P2-201ENST00000565017 355 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AC007599.1-201ENST00000568688 1174 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 RN7SL290P-201ENST00000578661 300 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 MIR3200-201ENST00000580767 85 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AC007546.1-201ENST00000619452 559 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 MIR8059-201ENST00000620427 81 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AC140479.6-201ENST00000633535 357 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 CR383658.2-201ENST00000547576 1525 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 AL161912.2-201ENST00000565707 3007 ntBASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SMC1BQ8NDV3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 XPOTP1-201ENST00000443317 2398 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC027228.2-201ENST00000567141 2154 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AL356095.1-201ENST00000417217 199 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 COX6CP15-201ENST00000426313 211 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 MTND4P6-201ENST00000438297 472 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 RPS29P7-201ENST00000439662 171 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 MTCO1P48-201ENST00000448024 1096 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AL162151.2-201ENST00000448875 158 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 RPS17P2-201ENST00000461663 408 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 MTCYBP17-201ENST00000503579 789 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC004069.2-201ENST00000505438 1114 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 KRT19P6-201ENST00000510983 209 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 Y_RNA.719-201ENST00000517156 106 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC090502.2-201ENST00000549267 280 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 RPL7P50-201ENST00000600588 727 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 SRGNP1-201ENST00000603392 451 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC010200.2-201ENST00000605098 235 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC068276.1-201ENST00000605793 379 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC087752.4-201ENST00000605911 462 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AP001521.1-201ENST00000609150 300 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 MIR6867-201ENST00000610636 67 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC099669.2-201ENST00000616549 437 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AC025048.6-202ENST00000627667 438 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 AP001642.1-201ENST00000624727 2117 ntBASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMC1BQ8NDV3 ADAM5-202ENST00000399789 1942 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AC107081.3-201ENST00000612715 2034 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 AP000542.2-201ENST00000623199 6179 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 RNU5F-7P-201ENST00000363696 115 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 RNY3P10-201ENST00000384764 102 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 SDHCP2-201ENST00000398565 501 ntBASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.5□□□□□ -1.53
SMC1BQ8NDV3 Y_RNA.599-201ENST00000410489 109 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms