Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RPL21P133-201ENST00000443666 476 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 RPL31P53-201ENST00000457065 348 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 RPL21P8-201ENST00000465083 535 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 HMGN2P13-201ENST00000476476 274 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 HMGB1P38-201ENST00000490557 577 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 RNU6-1308P-201ENST00000516817 103 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 FAM60CP-201ENST00000591086 664 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 AC015802.5-201ENST00000607478 399 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 SNORD39.4-201ENST00000620099 78 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.75□□□□□ -1.97
ZNF439Q8NDP4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 RNA5SP383-201ENST00000362934 120 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 MIR218-2-201ENST00000385006 110 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 RNU1-101P-201ENST00000391171 127 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 RPS29P4-201ENST00000414733 161 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC092017.2-201ENST00000427600 362 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 BX890604.2-201ENST00000427883 474 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 ETF1P3-201ENST00000430422 1160 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 RPS27P5-201ENST00000444247 244 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 BUD31P2-201ENST00000449374 300 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 RPL21P13-201ENST00000488305 481 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 KATNBL1P4-201ENST00000503545 918 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 KCTD9P5-201ENST00000504141 1170 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 SNORD116-30-201ENST00000516468 85 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 SNORA64.4-201ENST00000516632 81 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC023632.4-201ENST00000517783 191 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AL109618.2-201ENST00000605527 211 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AL590240.3-201ENST00000621416 943 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AC034229.5-201ENST00000624258 185 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 MIR4496-201ENST00000635896 61 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
ZNF439Q8NDP4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 MIR148B-201ENST00000362252 99 ntBASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC012065.2-201ENST00000421295 375 ntBASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC122718.1-201ENST00000439448 744 ntBASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 ATP5C1P1-201ENST00000441945 895 ntBASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AL590399.6-201ENST00000446396 307 ntBASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 HMGN1P18-201ENST00000457642 277 ntBASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC093663.1-201ENST00000497190 394 ntBASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 RN7SKP282-201ENST00000516824 299 ntBASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 RNA5SP380-201ENST00000517190 98 ntBASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.73□□□□□ -1.97
ZNF439Q8NDP4 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms