Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NPAS4Q8IUM7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NPAS4Q8IUM7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.96□□□□□ -1.45
NPAS4Q8IUM7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
NPAS4Q8IUM7 AC006484.1-201ENST00000435086 1884 ntBASIC5.96□□□□□ -1.45
NPAS4Q8IUM7 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
NPAS4Q8IUM7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
NPAS4Q8IUM7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.96□□□□□ -1.45
NPAS4Q8IUM7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 RNA5SP305-201ENST00000362665 119 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 RNU4-1-201ENST00000363925 141 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 RNU1-106P-201ENST00000384382 164 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 MIR1302-11-201ENST00000408051 138 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 MIR1302-9-201ENST00000408365 138 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 MIR1302-10-201ENST00000408734 138 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 MRPL50P2-201ENST00000416821 482 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 RNF10P1-201ENST00000418589 369 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 UQCRBP1-201ENST00000421129 336 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 TIMM9P1-201ENST00000436122 256 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 SNRPCP2-201ENST00000504370 475 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 FTH1P21-201ENST00000512179 511 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 snoU109.5-201ENST00000516231 132 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 SCARNA16.4-201ENST00000516956 187 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 HMGN1P28-201ENST00000521340 364 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AP000676.2-201ENST00000529711 301 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 OR5D15P-201ENST00000531671 942 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AL161713.1-201ENST00000555538 145 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AP001429.1-201ENST00000602568 530 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 MIR1302-2-201ENST00000607096 138 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AL133481.2-203ENST00000607558 139 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AC009233.1-201ENST00000616477 371 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AC005725.1-201ENST00000577346 2607 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AC010928.1-201ENST00000592477 1447 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AC090229.1-201ENST00000590983 1609 ntBASIC5.96□□□□□ -1.46
NPAS4Q8IUM7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 MTCO1P9-201ENST00000505577 1534 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AL592437.2-201ENST00000421655 2434 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 Y_RNA.159-201ENST00000363674 87 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 RN7SKP224-201ENST00000364140 325 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 RNU6-1078P-201ENST00000364522 103 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 RNU1-43P-201ENST00000365052 165 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 SNORA70E-201ENST00000384492 135 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AL133388.1-201ENST00000404509 287 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 SRSF1P1-201ENST00000424058 520 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC093655.2-201ENST00000425735 631 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AL590762.4-201ENST00000425885 253 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 TMEM183AP1-205ENST00000432739 290 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 RAC1P7-201ENST00000445367 377 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AL359893.1-201ENST00000447628 1580 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AK3P4-201ENST00000504283 583 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 HIGD1AP3-201ENST00000515857 278 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AF235103.2-201ENST00000525753 346 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 SETP7-201ENST00000552169 453 ntBASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.95□□□□□ -1.46
NPAS4Q8IUM7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms