Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC107016.1-201ENST00000550463 337 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 RN7SL600P-201ENST00000581811 299 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC020914.4-201ENST00000597690 277 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 uc_338.32-201ENST00000615087 172 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 MIR7151-201ENST00000617477 60 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 MIR7702-201ENST00000621931 59 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC048347.1-201ENST00000624621 427 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 NUP58P1-201ENST00000502546 1738 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 AC027287.1-201ENST00000553115 1453 ntBASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
NHLRC1Q6VVB1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NHLRC1Q6VVB1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NHLRC1Q6VVB1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 FAM3C2-201ENST00000312214 681 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 snoZ40.1-201ENST00000364540 72 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 RNU6-878P-201ENST00000384578 110 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 RN7SKP182-201ENST00000410772 298 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 RNU2-71P-201ENST00000411395 189 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 RPL23AP26-201ENST00000412728 464 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC012065.2-201ENST00000421295 375 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 MTND2P9-201ENST00000422293 931 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 RPL31P54-201ENST00000429803 370 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC127537.2-201ENST00000439258 465 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 VN1R10P-201ENST00000447106 875 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC007327.1-201ENST00000447461 264 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC092757.1-201ENST00000467293 467 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 PABPC1P3-201ENST00000469174 459 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC087312.1-201ENST00000471411 480 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC108078.3-201ENST00000502633 489 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC017037.1-201ENST00000508460 471 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AP003730.1-201ENST00000524605 285 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC009643.1-201ENST00000532030 391 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AL360157.1-201ENST00000565962 87 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC138915.2-201ENST00000569776 97 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 BNIP3P24-201ENST00000593398 557 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC128687.1-201ENST00000605304 619 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AL445423.1-201ENST00000609941 536 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC006329.2-201ENST00000611491 394 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AL138478.1-201ENST00000612252 832 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AL445567.2-201ENST00000618935 498 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC006963.1-201ENST00000624003 1052 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 AC092184.1-201ENST00000625042 715 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 MIR4278-201ENST00000636094 69 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 OR52H1-202ENST00000641796 1061 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 FAM35DP-201ENST00000323387 2712 ntBASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
NHLRC1Q6VVB1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AP000568.1-201ENST00000282964 442 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 RNU6-413P-201ENST00000384115 107 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 RNU2-37P-201ENST00000410695 177 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 MTATP6P20-201ENST00000414147 562 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 RAC1P3-201ENST00000416129 580 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 PTP4A1P5-201ENST00000420305 455 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms