Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
VARS2Q5ST30 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
VARS2Q5ST30 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 AC010332.2-201ENST00000613083 1904 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 SNORD113-8-201ENST00000363497 74 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 RNU6-595P-201ENST00000363944 107 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 AL590290.1-201ENST00000405336 380 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 RNU6-651P-201ENST00000411040 105 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 TOMM20P4-201ENST00000427861 435 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 AC073410.1-201ENST00000435125 589 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 ISCUP1-201ENST00000454451 448 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 AC022133.1-201ENST00000490961 571 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 FAM60DP-201ENST00000524174 632 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 AP000859.1-201ENST00000525536 307 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 AC063949.1-201ENST00000552900 865 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 FXNP1-201ENST00000555153 337 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 RN7SL199P-201ENST00000578752 281 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 RN7SL656P-201ENST00000579044 281 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 RN7SL404P-201ENST00000582421 281 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 AC012443.1-201ENST00000605605 231 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 SNX18P10-201ENST00000625014 519 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 AP002833.3-201ENST00000625075 2265 ntBASIC7.09□□□□□ -1.27
VARS2Q5ST30 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VARS2Q5ST30 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
VARS2Q5ST30 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
VARS2Q5ST30 AC008568.2-201ENST00000623862 2313 ntBASIC7.09□□□□□ -1.28
VARS2Q5ST30 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 AC093278.2-201ENST00000564956 2485 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 RNU6-755P-201ENST00000364400 103 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 RNA5SP433-201ENST00000364491 114 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 U8.7-201ENST00000364940 136 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 Y_RNA.331-201ENST00000365267 102 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 MIR186-201ENST00000384988 86 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 AC016769.3-201ENST00000396562 315 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 U3.42-201ENST00000408746 214 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 AL929472.1-201ENST00000417484 429 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 VTI1BP4-201ENST00000427516 527 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 Y_RNA.638-201ENST00000459374 113 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 OR1E3-201ENST00000575608 948 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 MIR4308-201ENST00000580634 81 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 AC017100.2-201ENST00000584628 355 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 AL589743.6-201ENST00000611025 117 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms