Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RNU6-560P-201ENST00000364007 108 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 RNU6-444P-201ENST00000383988 108 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 RNU6-83P-201ENST00000384568 112 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 MIR708-201ENST00000390708 88 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 AL136133.1-201ENST00000413694 376 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP41Q3LFD5 RPP40P1-201ENST00000426762 456 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 ELOCP18-201ENST00000434209 337 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 RPL21P71-201ENST00000465598 459 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 SOD1P3-201ENST00000518682 454 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC025627.2-201ENST00000576220 160 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 BNIP3P26-201ENST00000600827 554 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 MIR6868-201ENST00000611215 58 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC023158.2-201ENST00000614876 543 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC120349.3-201ENST00000624377 529 ntBASIC4.34□□□□□ -1.71
USP41Q3LFD5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP41Q3LFD5 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP41Q3LFD5 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP41Q3LFD5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.34□□□□□ -1.71
USP41Q3LFD5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.34□□□□□ -1.72
USP41Q3LFD5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
USP41Q3LFD5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USP41Q3LFD5 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP41Q3LFD5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USP41Q3LFD5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AL592437.2-201ENST00000421655 2434 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC107081.3-201ENST00000612715 2034 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC018555.1-201ENST00000567548 1980 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC109315.1-201ENST00000584143 1347 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USP41Q3LFD5 RNU1-15P-201ENST00000353977 144 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 RNU6-115P-201ENST00000364310 107 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 RNU6-1293P-201ENST00000384077 107 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 DSTNP4-201ENST00000399472 474 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 RPL23AP47-201ENST00000408017 460 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 RNU2-42P-201ENST00000410697 113 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC004022.2-201ENST00000413824 193 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 BOLA3P4-201ENST00000418151 400 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC233981.1-201ENST00000423224 461 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 RPL7P44-201ENST00000424827 742 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AL358472.1-201ENST00000431295 329 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 USP9YP31-201ENST00000431405 881 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC023347.2-201ENST00000433994 462 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 MTCYBP31-201ENST00000438855 1122 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 RPL23AP89-201ENST00000439324 255 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 RFC5P1-201ENST00000454419 874 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 MTCO2P6-201ENST00000463134 685 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 RPS4XP15-201ENST00000489210 795 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 MTCYBP16-201ENST00000509187 1129 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AP001189.2-201ENST00000527320 189 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC107016.1-201ENST00000550463 337 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC010198.2-201ENST00000550612 259 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 NBEAP1-201ENST00000554452 979 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 MIR4444-1-201ENST00000581696 74 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 MIR4444-2-201ENST00000584390 74 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 BNIP3P22-201ENST00000593399 556 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC080013.3-201ENST00000606839 578 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.33□□□□□ -1.72
USP41Q3LFD5 AC097478.2-201ENST00000610572 514 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 RNU6-156P-201ENST00000621869 107 ntBASIC4.33□□□□□ -1.72
USP41Q3LFD5 MIR7702-201ENST00000621931 59 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms