Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC140076.1-201ENST00000449897 361 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.53□□□□□ -2
HIST1H1AQ02539 RPL7P15-201ENST00000461190 712 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H1AQ02539 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.53□□□□□ -2
HIST1H1AQ02539 MTCO3P35-201ENST00000485582 781 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.53□□□□□ -2
HIST1H1AQ02539 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.53□□□□□ -2
HIST1H1AQ02539 AC112198.1-201ENST00000505369 1220 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 ARL4AP2-201ENST00000507378 601 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC147055.1-201ENST00000509261 750 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 FCF1P8-201ENST00000510322 597 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 RNA5SP217-201ENST00000515959 91 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 RNU1-95P-201ENST00000516357 160 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 RNU1-128P-201ENST00000516704 160 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H1AQ02539 OR4R3P-201ENST00000525084 838 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 MTCYBP41-201ENST00000528913 1123 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC008083.2-201ENST00000546707 476 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.53□□□□□ -2
HIST1H1AQ02539 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.53□□□□□ -2
HIST1H1AQ02539 AC015917.1-201ENST00000579654 510 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.53□□□□□ -2
HIST1H1AQ02539 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.53□□□□□ -2
HIST1H1AQ02539 AC006116.7-201ENST00000590141 756 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.53□□□□□ -2
HIST1H1AQ02539 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H1AQ02539 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AL121772.2-201ENST00000614331 297 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC245389.2-201ENST00000616023 576 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC243756.2-201ENST00000618406 463 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC242843.1-201ENST00000618702 573 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 SNORD39.4-201ENST00000620099 78 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H1AQ02539 AL034408.1-202ENST00000636088 415 ntBASIC2.53□□□□□ -2
HIST1H1AQ02539 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.53□□□□□ -2
HIST1H1AQ02539 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.53□□□□□ -2
HIST1H1AQ02539 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HIST1H1AQ02539 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HIST1H1AQ02539 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H1AQ02539 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.53□□□□□ -2
HIST1H1AQ02539 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HIST1H1AQ02539 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 RNU6-335P-201ENST00000364563 113 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 RNU1-64P-201ENST00000365443 163 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 MIR218-2-201ENST00000385006 110 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 RNA5SP44-201ENST00000410446 133 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 RPL7P10-201ENST00000417407 739 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AL139281.1-201ENST00000422120 335 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 OR2AS1P-201ENST00000427827 319 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 CYCSP4-201ENST00000429682 331 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 RPS24P8-201ENST00000431490 402 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AC007389.2-201ENST00000434630 306 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 HSPD1P21-201ENST00000436541 245 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AL031663.1-201ENST00000437445 219 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 RN7SL75P-201ENST00000461926 281 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AL136126.1-201ENST00000473603 402 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AC111000.5-201ENST00000506559 1178 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 RN7SKP13-201ENST00000515933 244 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 RNU6-711P-201ENST00000517255 106 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 OR8I1P-201ENST00000529291 931 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AC067852.3-201ENST00000589177 561 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AC069304.3-201ENST00000603938 1084 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 AC015802.5-201ENST00000607478 399 ntBASIC2.52□□□□□ -2.01
HIST1H1AQ02539 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.52□□□□□ -2.01
HIST1H1AQ02539 DDX6P1-205ENST00000441966 1436 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 RNU4-35P-201ENST00000362588 141 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 RNA5SP124-201ENST00000362739 110 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 RNU6-666P-201ENST00000363499 107 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 U3.6-201ENST00000363622 211 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 RPS3AP26-201ENST00000398259 784 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 RN7SKP111-201ENST00000410349 271 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 CST9LP2-201ENST00000437612 320 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms