Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 RNA5SP42-201ENST00000364278 115 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CACNA1BQ00975 MIR27B-201ENST00000385129 97 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 RPS4XP7-201ENST00000406274 780 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 RPS26P15-201ENST00000488067 348 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 AC109458.1-201ENST00000508858 316 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CACNA1BQ00975 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 SETP1-201ENST00000556014 845 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 PWAR6-201ENST00000552334 4618 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 SNORA3.2-201ENST00000408221 125 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CACNA1BQ00975 NDUFB1P1-201ENST00000435191 180 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CACNA1BQ00975 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CACNA1BQ00975 RPS4XP22-201ENST00000480755 780 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 AC008489.1-201ENST00000524271 483 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 NTAN1P1-201ENST00000603150 646 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 MIR6779-201ENST00000617283 64 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 SNORD39.4-201ENST00000620099 78 ntBASIC2.9□□□□□ -1.95
CACNA1BQ00975 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CACNA1BQ00975 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1BQ00975 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1BQ00975 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1BQ00975 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1BQ00975 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1BQ00975 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 MIR448-201ENST00000362131 111 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 RNA5SP289-201ENST00000362332 137 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 RNU6-618P-201ENST00000363518 112 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 MIR34A-201ENST00000385130 110 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 RNA5SP229-201ENST00000410809 99 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 RNA5SP104-201ENST00000410989 118 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 IFNNP1-201ENST00000429219 553 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 AC010469.1-201ENST00000463864 576 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 RPS3AP50-201ENST00000487064 803 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 AC116337.1-201ENST00000509680 687 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 RFPL4AP3-201ENST00000515267 345 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1BQ00975 AL139395.1-201ENST00000603662 160 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 AC025034.2-201ENST00000623264 286 ntBASIC2.89□□□□□ -1.95
CACNA1BQ00975 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1BQ00975 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.89□□□□□ -1.95
CACNA1BQ00975 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CACNA1BQ00975 Y_RNA.178-201ENST00000363832 102 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 AC074367.1-201ENST00000438685 1125 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 AC092809.1-201ENST00000441469 474 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 AP000936.2-201ENST00000447151 681 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1BQ00975 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 SEC11B-201ENST00000518383 499 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 NDUFA5P6-201ENST00000542110 379 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1BQ00975 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1BQ00975 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1BQ00975 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1BQ00975 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1BQ00975 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1BQ00975 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1BQ00975 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 AC017002.4-201ENST00000604721 1525 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 RNU1-70P-201ENST00000362618 164 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 RNU6-582P-201ENST00000362989 107 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CACNA1BQ00975 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 RNU2-52P-201ENST00000410680 190 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 RNU4-53P-201ENST00000410828 140 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 AC087499.2-201ENST00000432861 149 ntBASIC2.88□□□□□ -1.95
CACNA1BQ00975 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.88□□□□□ -1.95
CACNA1BQ00975 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms