Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC097504.2-201ENST00000608088 454 ntBASIC3.66□□□□□ -1.82
CDKL1Q00532 AL391834.2-201ENST00000609982 546 ntBASIC3.66□□□□□ -1.82
CDKL1Q00532 AL592295.2-201ENST00000612578 206 ntBASIC3.66□□□□□ -1.82
CDKL1Q00532 RNVU1-4-201ENST00000612985 164 ntBASIC3.66□□□□□ -1.82
CDKL1Q00532 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.66□□□□□ -1.82
CDKL1Q00532 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL1Q00532 AL354798.1-201ENST00000622505 329 ntBASIC3.66□□□□□ -1.82
CDKL1Q00532 FP236240.3-201ENST00000623061 327 ntBASIC3.66□□□□□ -1.82
CDKL1Q00532 AC073073.2-201ENST00000609827 2578 ntBASIC3.66□□□□□ -1.82
CDKL1Q00532 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CDKL1Q00532 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL1Q00532 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL1Q00532 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDKL1Q00532 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.66□□□□□ -1.82
CDKL1Q00532 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
CDKL1Q00532 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDKL1Q00532 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.65□□□□□ -1.82
CDKL1Q00532 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDKL1Q00532 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
CDKL1Q00532 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL1Q00532 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL1Q00532 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL1Q00532 RNU6-582P-201ENST00000362989 107 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 RNU6-283P-201ENST00000364788 107 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL1Q00532 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 RNU6-628P-201ENST00000410675 107 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 AC008280.1-201ENST00000418851 412 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 USP9YP21-201ENST00000420603 432 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AC013410.2-201ENST00000422627 201 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 PSMA2P3-201ENST00000429685 675 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 UBE2V1P1-201ENST00000430836 445 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 MOB1AP1-201ENST00000430903 535 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 HSFY7P-201ENST00000432672 318 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL1Q00532 HSFY8P-201ENST00000437934 318 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.65□□□□□ -1.83
CDKL1Q00532 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 Z99714.1-201ENST00000450463 807 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 NDUFA5P7-201ENST00000452914 242 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 MRPL42P4-201ENST00000453267 443 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 NANOGP10-201ENST00000453325 895 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 HSFY5P-201ENST00000453726 309 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AC099563.1-201ENST00000456086 418 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.65□□□□□ -1.83
CDKL1Q00532 VN1R105P-201ENST00000486595 910 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 NIPA2P2-201ENST00000496376 1083 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AL139099.1-201ENST00000497398 403 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 DYNLL1P6-201ENST00000503440 264 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 SNX5P1-201ENST00000505757 1041 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.65□□□□□ -1.83
CDKL1Q00532 HIGD1AP3-201ENST00000515857 278 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 RNU6-352P-201ENST00000516908 107 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AC091163.3-201ENST00000518269 1144 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AC022695.1-201ENST00000522089 237 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 MTCO3P15-201ENST00000526563 574 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL1Q00532 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL1Q00532 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.65□□□□□ -1.83
CDKL1Q00532 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.65□□□□□ -1.83
CDKL1Q00532 AC005344.1-201ENST00000613391 459 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 AC098679.5-201ENST00000624394 571 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.65□□□□□ -1.83
CDKL1Q00532 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CDKL1Q00532 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDKL1Q00532 DCAF13P1-201ENST00000495256 1330 ntBASIC3.65□□□□□ -1.83
CDKL1Q00532 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDKL1Q00532 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL1Q00532 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL1Q00532 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL1Q00532 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL1Q00532 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDKL1Q00532 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CDKL1Q00532 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDKL1Q00532 SNORA70E-201ENST00000384492 135 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 RNU6-441P-201ENST00000384545 106 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDKL1Q00532 AL590704.1-201ENST00000402856 794 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 MTCO3P31-201ENST00000405526 789 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 AC069218.2-201ENST00000411665 344 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 AL136133.1-201ENST00000413694 376 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 RPS7P9-201ENST00000414704 586 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 AL591419.1-201ENST00000427423 339 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 AC004975.1-201ENST00000428733 208 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 FTH1P6-201ENST00000430768 320 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 PTGES3P1-201ENST00000439531 483 ntBASIC3.64□□□□□ -1.83
CDKL1Q00532 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL1Q00532 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.64□□□□□ -1.83
CDKL1Q00532 AC022034.3-201ENST00000471393 478 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms