Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC118465.1-201ENST00000513820 1271 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AC008694.2-201ENST00000517591 306 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CL1P78423 HSPA8P13-201ENST00000523715 472 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AC087373.1-201ENST00000524920 491 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AC239860.2-201ENST00000525886 270 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.62□□□□□ -1.83
CX3CL1P78423 RN7SL690P-201ENST00000582087 240 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AC104785.1-201ENST00000603220 588 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AC008638.3-201ENST00000603341 463 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 RPL23AP92-201ENST00000603609 255 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 MIR6780A-201ENST00000615089 68 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AL031667.3-201ENST00000620124 655 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 AC018816.2-201ENST00000621460 353 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CL1P78423 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CL1P78423 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.62□□□□□ -1.83
CX3CL1P78423 AL356489.2-201ENST00000566968 3528 ntBASIC3.62□□□□□ -1.83
CX3CL1P78423 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CX3CL1P78423 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CX3CL1P78423 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.61□□□□□ -1.83
CX3CL1P78423 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CX3CL1P78423 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CX3CL1P78423 RPL23AP57-201ENST00000332361 466 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CX3CL1P78423 Y_RNA.18-201ENST00000362461 102 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 RNU6-553P-201ENST00000364047 96 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 SNORA70F-201ENST00000384142 135 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CX3CL1P78423 MTCYBP24-201ENST00000420387 1106 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 GLRXP1-201ENST00000423261 334 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC093698.1-201ENST00000423843 571 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 RPS12P10-201ENST00000427031 377 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 RPL21P91-201ENST00000429231 479 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 RPL23AP25-201ENST00000430973 463 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CL1P78423 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CL1P78423 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CL1P78423 AL162591.2-201ENST00000449634 317 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CL1P78423 AL121877.1-201ENST00000453704 622 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC133473.1-201ENST00000455173 299 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 ARPC3P2-201ENST00000457786 533 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 MEMO1P3-201ENST00000459811 302 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 RN7SL354P-201ENST00000469282 294 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CL1P78423 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CL1P78423 RPF2P2-201ENST00000504693 896 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CL1P78423 AC111000.2-201ENST00000507775 550 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC109458.1-201ENST00000508858 316 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC006499.6-201ENST00000511169 607 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC010486.3-201ENST00000511602 785 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.61□□□□□ -1.83
CX3CL1P78423 RNU6-678P-201ENST00000516832 109 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 RNU4-60P-201ENST00000517239 135 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CL1P78423 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.61□□□□□ -1.83
CX3CL1P78423 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.61□□□□□ -1.83
CX3CL1P78423 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.61□□□□□ -1.83
CX3CL1P78423 MIR4443-201ENST00000585052 53 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.61□□□□□ -1.83
CX3CL1P78423 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.61□□□□□ -1.83
CX3CL1P78423 AL392048.1-201ENST00000613946 534 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.61□□□□□ -1.83
CX3CL1P78423 OR8B1P-202ENST00000641132 1178 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.61□□□□□ -1.83
CX3CL1P78423 AC018529.3-201ENST00000624212 2254 ntBASIC3.61□□□□□ -1.83
CX3CL1P78423 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CX3CL1P78423 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CX3CL1P78423 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CX3CL1P78423 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.6□□□□□ -1.83
CX3CL1P78423 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.6□□□□□ -1.83
CX3CL1P78423 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.6□□□□□ -1.83
CX3CL1P78423 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CX3CL1P78423 AC026951.1-201ENST00000559530 2459 ntBASIC3.6□□□□□ -1.83
CX3CL1P78423 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms