Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 NF1P10-201ENST00000613227 742 ntBASIC2.86□□□□□ -1.95
AP3S2P59780 AL354976.1-201ENST00000613843 387 ntBASIC2.86□□□□□ -1.95
AP3S2P59780 AC006111.3-201ENST00000622137 383 ntBASIC2.86□□□□□ -1.95
AP3S2P59780 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.86□□□□□ -1.95
AP3S2P59780 AP001784.1-201ENST00000624107 428 ntBASIC2.86□□□□□ -1.95
AP3S2P59780 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.86□□□□□ -1.95
AP3S2P59780 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.86□□□□□ -1.95
AP3S2P59780 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.86□□□□□ -1.95
AP3S2P59780 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.86□□□□□ -1.95
AP3S2P59780 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
AP3S2P59780 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.86□□□□□ -1.95
AP3S2P59780 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
AP3S2P59780 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.86□□□□□ -1.95
AP3S2P59780 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
AP3S2P59780 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
AP3S2P59780 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
AP3S2P59780 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
AP3S2P59780 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
AP3S2P59780 RNU6-670P-201ENST00000364312 104 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.85□□□□□ -1.95
AP3S2P59780 RNU6-837P-201ENST00000391056 108 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 OR6C69P-201ENST00000394268 893 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 MIR887-201ENST00000401258 79 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC2.85□□□□□ -1.95
AP3S2P59780 BX510359.3-201ENST00000422168 306 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 MTATP6P4-201ENST00000427725 675 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.85□□□□□ -1.95
AP3S2P59780 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.85□□□□□ -1.95
AP3S2P59780 RPS23P3-201ENST00000470993 430 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
AP3S2P59780 AP000926.3-201ENST00000497201 299 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 AC111000.2-201ENST00000507775 550 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 AC147055.1-201ENST00000509261 750 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.85□□□□□ -1.95
AP3S2P59780 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC2.85□□□□□ -1.95
AP3S2P59780 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.85□□□□□ -1.95
AP3S2P59780 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.85□□□□□ -1.95
AP3S2P59780 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.85□□□□□ -1.95
AP3S2P59780 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.85□□□□□ -1.95
AP3S2P59780 uc_338.1-201ENST00000612113 180 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.85□□□□□ -1.95
AP3S2P59780 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
AP3S2P59780 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
AP3S2P59780 AP003122.6-201ENST00000623831 495 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 AC091903.1-201ENST00000624322 454 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 AP000676.4-201ENST00000624659 623 ntBASIC2.85□□□□□ -1.95
AP3S2P59780 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.85□□□□□ -1.95
AP3S2P59780 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
AP3S2P59780 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AP3S2P59780 SNORA14A-201ENST00000364773 135 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 U8.9-201ENST00000365667 134 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AP3S2P59780 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
AP3S2P59780 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
AP3S2P59780 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.84□□□□□ -1.95
AP3S2P59780 AL590762.4-201ENST00000425885 253 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 AC093151.1-201ENST00000427711 313 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.84□□□□□ -1.95
AP3S2P59780 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.84□□□□□ -1.95
AP3S2P59780 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.84□□□□□ -1.95
AP3S2P59780 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.84□□□□□ -1.95
AP3S2P59780 AL590639.1-201ENST00000456484 337 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 AL133162.1-201ENST00000463228 453 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
AP3S2P59780 GAPDHP39-201ENST00000481866 979 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.84□□□□□ -1.95
AP3S2P59780 AC008494.2-201ENST00000514544 370 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 SNORA31.1-201ENST00000515993 133 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 SNORA31.5-201ENST00000516190 133 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 RN7SKP116-201ENST00000516902 319 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 RN7SKP96-201ENST00000516948 297 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 SNORA31.20-201ENST00000517111 133 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
AP3S2P59780 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.84□□□□□ -1.95
AP3S2P59780 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.84□□□□□ -1.95
AP3S2P59780 AC087499.8-201ENST00000578406 226 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.84□□□□□ -1.95
AP3S2P59780 DUXAP4-201ENST00000603046 613 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 MIR6867-201ENST00000610636 67 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.84□□□□□ -1.95
AP3S2P59780 AC131902.3-201ENST00000611767 581 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 AL356321.1-201ENST00000621360 228 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 FP236240.3-201ENST00000623061 327 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 AL356490.1-201ENST00000623079 479 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
AP3S2P59780 OR52H1-202ENST00000641796 1061 ntBASIC2.84□□□□□ -1.95
AP3S2P59780 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
AP3S2P59780 ZNF807-201ENST00000328088 1707 ntBASIC2.84□□□□□ -1.96
AP3S2P59780 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
AP3S2P59780 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
AP3S2P59780 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.84□□□□□ -1.96
AP3S2P59780 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
AP3S2P59780 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.84□□□□□ -1.96
AP3S2P59780 CR383658.2-201ENST00000547576 1525 ntBASIC2.83□□□□□ -1.96
AP3S2P59780 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
AP3S2P59780 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
AP3S2P59780 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.83□□□□□ -1.96
AP3S2P59780 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms