Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU7-125P-201ENST00000458760 62 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN20P56880 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN20P56880 AC026979.1-201ENST00000492525 396 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.96□□□□□ -1.78
CLDN20P56880 RNY4P37-201ENST00000516225 96 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN20P56880 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN20P56880 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AC107016.1-201ENST00000550463 337 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 LSM6P2-201ENST00000552208 177 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN20P56880 VN1R90P-201ENST00000595717 726 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AC079587.1-201ENST00000603846 277 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AC010857.1-201ENST00000606398 594 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AL392048.1-201ENST00000613946 534 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.96□□□□□ -1.78
CLDN20P56880 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AC068722.2-201ENST00000618734 544 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AL607023.1-201ENST00000620045 248 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.96□□□□□ -1.78
CLDN20P56880 AL023881.1-201ENST00000621088 301 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AC004943.3-201ENST00000624116 600 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 AC092184.1-201ENST00000625042 715 ntBASIC3.96□□□□□ -1.78
CLDN20P56880 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CLDN20P56880 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN20P56880 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN20P56880 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN20P56880 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.96□□□□□ -1.78
CLDN20P56880 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN20P56880 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLDN20P56880 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN20P56880 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
CLDN20P56880 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CLDN20P56880 MFSD8-242ENST00000641690 4199 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN20P56880 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN20P56880 RNU6-1243P-201ENST00000364028 107 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 SNORA4.1-201ENST00000364263 144 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 RNA5SP306-201ENST00000411087 107 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AC073264.1-201ENST00000411508 416 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AC090960.1-201ENST00000421072 306 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AL138785.1-201ENST00000425821 331 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN20P56880 PRELID3BP10-201ENST00000431957 584 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 RPS3AP54-201ENST00000435535 734 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLDN20P56880 GSTA7P-201ENST00000438425 448 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AL445567.1-201ENST00000439121 144 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.95□□□□□ -1.78
CLDN20P56880 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 NCOR1P1-202ENST00000486162 291 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 OR4G11P-201ENST00000492842 939 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 HMGB1P21-201ENST00000502313 581 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 ATP1B1P1-201ENST00000509767 915 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 RNU6-232P-201ENST00000517144 64 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN20P56880 IGLVIV-53-201ENST00000520107 367 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.95□□□□□ -1.78
CLDN20P56880 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN20P56880 AC087373.1-201ENST00000524920 491 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 ZNF705CP-201ENST00000530515 889 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN20P56880 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
CLDN20P56880 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN20P56880 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN20P56880 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN20P56880 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.95□□□□□ -1.78
CLDN20P56880 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN20P56880 AC121247.2-201ENST00000604776 136 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AC113403.1-201ENST00000604910 193 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.95□□□□□ -1.78
CLDN20P56880 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CLDN20P56880 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CLDN20P56880 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLDN20P56880 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN20P56880 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLDN20P56880 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN20P56880 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN20P56880 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN20P56880 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
CLDN20P56880 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLDN20P56880 OR5BR1P-201ENST00000524992 1330 ntBASIC3.95□□□□□ -1.78
CLDN20P56880 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.94□□□□□ -1.78
CLDN20P56880 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 ELL2P4-201ENST00000446870 1376 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CLDN20P56880 SNRPEP3-201ENST00000338402 276 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 SNORA62-201ENST00000365493 153 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLDN20P56880 ATP5F1P4-201ENST00000397288 746 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AL023807.1-201ENST00000407932 359 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC069218.2-201ENST00000411665 344 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 AC011933.1-201ENST00000413334 321 ntBASIC3.94□□□□□ -1.78
CLDN20P56880 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms