Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN6P56747 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN6P56747 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN6P56747 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN6P56747 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN6P56747 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN6P56747 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN6P56747 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN6P56747 RPL23AP57-201ENST00000332361 466 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 RNA5SP197-201ENST00000363357 119 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN6P56747 U3.19-201ENST00000390893 196 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 HMGB1P10-201ENST00000395823 563 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CLDN6P56747 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN6P56747 RNU2-21P-201ENST00000410368 188 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN6P56747 RPL21P109-201ENST00000422213 475 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.34□□□□□ -1.87
CLDN6P56747 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN6P56747 CKS1BP5-201ENST00000434172 273 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN6P56747 RPS7P5-201ENST00000441482 581 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 HMGB1P48-201ENST00000446155 598 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.34□□□□□ -1.87
CLDN6P56747 AC146507.1-201ENST00000468335 354 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 TRBV8-2-201ENST00000475637 270 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 AC106872.2-201ENST00000494303 480 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 AC080014.1-201ENST00000496877 1201 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 AC020893.1-201ENST00000502452 580 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN6P56747 AC021678.1-201ENST00000505195 936 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 AC093755.1-201ENST00000512950 1023 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 RNU2-58P-201ENST00000516403 183 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN6P56747 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.34□□□□□ -1.87
CLDN6P56747 AC099489.2-201ENST00000574976 260 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN6P56747 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN6P56747 NTAN1P1-201ENST00000603150 646 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN6P56747 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.34□□□□□ -1.87
CLDN6P56747 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN6P56747 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN6P56747 FAM157B-203ENST00000639350 358 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 MTND5P3-201ENST00000438536 1800 ntBASIC3.34□□□□□ -1.87
CLDN6P56747 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLDN6P56747 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.34□□□□□ -1.87
CLDN6P56747 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLDN6P56747 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CLDN6P56747 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLDN6P56747 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN6P56747 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN6P56747 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN6P56747 AL357075.1-201ENST00000404107 726 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 RN7SKP53-201ENST00000411337 315 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 RHEBP3-201ENST00000411920 351 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AL691447.1-201ENST00000419456 387 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AC241520.1-201ENST00000422654 1099 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN6P56747 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN6P56747 PSMA2P3-201ENST00000429685 675 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN6P56747 AC069540.1-201ENST00000446320 988 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 BX276092.4-201ENST00000452056 248 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 MTCO3P16-201ENST00000454456 754 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.33□□□□□ -1.88
CLDN6P56747 AL035404.1-201ENST00000497982 568 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN6P56747 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN6P56747 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN6P56747 AC008494.2-201ENST00000514544 370 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN6P56747 RN7SKP209-201ENST00000516888 304 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 RNU4-60P-201ENST00000517239 135 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 MTND2P26-201ENST00000528255 1029 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN6P56747 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN6P56747 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN6P56747 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN6P56747 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.33□□□□□ -1.88
CLDN6P56747 AC005242.1-201ENST00000585658 438 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AC007687.1-201ENST00000602704 304 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AC018618.2-201ENST00000604770 446 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AL033523.1-201ENST00000605153 153 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 ATP5A1P2-202ENST00000616464 443 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AC138932.5-201ENST00000617759 563 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 AC022079.2-201ENST00000619739 566 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 MIR4496-201ENST00000635896 61 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN6P56747 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.33□□□□□ -1.88
CLDN6P56747 HSPA8P1-201ENST00000425843 1833 ntBASIC3.33□□□□□ -1.88
CLDN6P56747 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN6P56747 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLDN6P56747 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CLDN6P56747 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN6P56747 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN6P56747 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN6P56747 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms