Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC008507.1-201ENST00000587506 734 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX1P55347 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX1P55347 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AC091488.1-201ENST00000604239 660 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AC026741.1-201ENST00000605892 482 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AC092653.1-201ENST00000608509 531 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 AC021851.1-201ENST00000608537 1082 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX1P55347 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.44□□□□□ -1.86
PKNOX1P55347 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX1P55347 AL513302.2-201ENST00000562313 1842 ntBASIC3.44□□□□□ -1.86
PKNOX1P55347 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX1P55347 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX1P55347 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PKNOX1P55347 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.44□□□□□ -1.86
PKNOX1P55347 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.43□□□□□ -1.86
PKNOX1P55347 AL133383.2-201ENST00000622958 2336 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKNOX1P55347 AC138915.3-201ENST00000562908 1389 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKNOX1P55347 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PKNOX1P55347 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PKNOX1P55347 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
PKNOX1P55347 EI24P2-201ENST00000397776 1076 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
PKNOX1P55347 RNU2-37P-201ENST00000410695 177 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 RN7SKP53-201ENST00000411337 315 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 RPS7P13-201ENST00000413955 498 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 AC016769.2-201ENST00000414815 475 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX1P55347 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX1P55347 MTCO2P1-201ENST00000424648 477 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX1P55347 AC092170.1-201ENST00000440211 356 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 RAB11AP1-201ENST00000442978 646 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 RPL12P26-201ENST00000452430 487 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 GTF2IP12-201ENST00000456547 356 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 AC087312.1-201ENST00000471411 480 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 AC098799.1-201ENST00000504752 800 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX1P55347 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.43□□□□□ -1.86
PKNOX1P55347 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.43□□□□□ -1.86
PKNOX1P55347 AC016065.2-201ENST00000514530 444 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 RNU2-58P-201ENST00000516403 183 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 MIR2276-201ENST00000516886 89 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX1P55347 AL389895.1-201ENST00000554127 252 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 HSPE1P5-201ENST00000561489 272 ntBASIC3.43□□□□□ -1.86
PKNOX1P55347 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX1P55347 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.43□□□□□ -1.86
PKNOX1P55347 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.43□□□□□ -1.86
PKNOX1P55347 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.43□□□□□ -1.86
PKNOX1P55347 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKNOX1P55347 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKNOX1P55347 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKNOX1P55347 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKNOX1P55347 MTCO1P24-201ENST00000515438 1558 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PKNOX1P55347 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PKNOX1P55347 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PKNOX1P55347 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PKNOX1P55347 SNORA51.12-201ENST00000384448 134 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 SNORD65C-201ENST00000390962 71 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX1P55347 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.42□□□□□ -1.86
PKNOX1P55347 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.42□□□□□ -1.86
PKNOX1P55347 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.42□□□□□ -1.86
PKNOX1P55347 GLRXP1-201ENST00000423261 334 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AP000907.1-201ENST00000428428 510 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.42□□□□□ -1.86
PKNOX1P55347 H2AFZP6-201ENST00000444403 394 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AL929288.2-201ENST00000446368 407 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX1P55347 AL096803.2-201ENST00000450032 677 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AC007967.1-201ENST00000455422 1159 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 BX248409.1-201ENST00000455497 255 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.42□□□□□ -1.86
PKNOX1P55347 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.42□□□□□ -1.86
PKNOX1P55347 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 MTCO2P9-201ENST00000503214 694 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AC112518.2-201ENST00000508565 425 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.42□□□□□ -1.86
PKNOX1P55347 AC007991.1-201ENST00000522680 631 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AP001636.2-201ENST00000525517 696 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX1P55347 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX1P55347 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 SERPINE4P-201ENST00000554978 281 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.42□□□□□ -1.86
PKNOX1P55347 AL136520.1-202ENST00000555494 763 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 EIF5A2P1-201ENST00000564027 460 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AC023824.3-201ENST00000569003 562 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AC022916.3-201ENST00000592961 742 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 VN1R88P-201ENST00000596787 292 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.42□□□□□ -1.86
PKNOX1P55347 AL109659.3-201ENST00000624985 950 ntBASIC3.42□□□□□ -1.86
PKNOX1P55347 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PKNOX1P55347 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PKNOX1P55347 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms