Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNU6-301P-201ENST00000384277 107 ntBASIC4.16□□□□□ -1.74
RFC4P35249 AC004022.2-201ENST00000413824 193 ntBASIC4.16□□□□□ -1.74
RFC4P35249 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFC4P35249 AC074367.1-201ENST00000438685 1125 ntBASIC4.16□□□□□ -1.74
RFC4P35249 MTND2P25-201ENST00000449028 610 ntBASIC4.16□□□□□ -1.74
RFC4P35249 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.16□□□□□ -1.74
RFC4P35249 HMGB3P30-201ENST00000457863 606 ntBASIC4.16□□□□□ -1.74
RFC4P35249 RPL21P103-201ENST00000479921 488 ntBASIC4.16□□□□□ -1.74
RFC4P35249 AC106872.2-201ENST00000494303 480 ntBASIC4.16□□□□□ -1.74
RFC4P35249 PSMA2P1-201ENST00000526365 646 ntBASIC4.16□□□□□ -1.74
RFC4P35249 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.16□□□□□ -1.74
RFC4P35249 AC245128.3-201ENST00000594721 748 ntBASIC4.16□□□□□ -1.74
RFC4P35249 AC116312.1-201ENST00000606841 314 ntBASIC4.16□□□□□ -1.74
RFC4P35249 AL157817.1-201ENST00000614264 790 ntBASIC4.16□□□□□ -1.74
RFC4P35249 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.16□□□□□ -1.74
RFC4P35249 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFC4P35249 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFC4P35249 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFC4P35249 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.15□□□□□ -1.74
RFC4P35249 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RFC4P35249 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.15□□□□□ -1.74
RFC4P35249 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFC4P35249 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RFC4P35249 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RFC4P35249 USP12PY-201ENST00000427677 1064 ntBASIC4.15□□□□□ -1.75
RFC4P35249 MTCO1P57-201ENST00000432182 261 ntBASIC4.15□□□□□ -1.75
RFC4P35249 AL606490.7-201ENST00000433136 191 ntBASIC4.15□□□□□ -1.75
RFC4P35249 AL353705.1-201ENST00000433468 480 ntBASIC4.15□□□□□ -1.75
RFC4P35249 MTCO1P52-201ENST00000433928 531 ntBASIC4.15□□□□□ -1.75
RFC4P35249 USP9YP7-201ENST00000436723 430 ntBASIC4.15□□□□□ -1.75
RFC4P35249 SETP5-201ENST00000437270 562 ntBASIC4.15□□□□□ -1.75
RFC4P35249 AC105402.2-201ENST00000438503 358 ntBASIC4.15□□□□□ -1.75
RFC4P35249 Z99127.2-201ENST00000441426 334 ntBASIC4.15□□□□□ -1.75
RFC4P35249 ATP5C1P1-201ENST00000441945 895 ntBASIC4.15□□□□□ -1.75
RFC4P35249 USP9YP32-201ENST00000452432 430 ntBASIC4.15□□□□□ -1.75
RFC4P35249 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.15□□□□□ -1.75
RFC4P35249 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.15□□□□□ -1.75
RFC4P35249 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.15□□□□□ -1.75
RFC4P35249 AP006245.1-201ENST00000522549 120 ntBASIC4.15□□□□□ -1.75
RFC4P35249 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.15□□□□□ -1.75
RFC4P35249 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.15□□□□□ -1.75
RFC4P35249 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.15□□□□□ -1.75
RFC4P35249 AL049870.4-201ENST00000555741 486 ntBASIC4.15□□□□□ -1.75
RFC4P35249 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.15□□□□□ -1.75
RFC4P35249 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.15□□□□□ -1.75
RFC4P35249 AC015917.1-201ENST00000579654 510 ntBASIC4.15□□□□□ -1.75
RFC4P35249 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.15□□□□□ -1.75
RFC4P35249 PCNAP1-202ENST00000595299 752 ntBASIC4.15□□□□□ -1.75
RFC4P35249 OR2AS2P-201ENST00000606902 342 ntBASIC4.15□□□□□ -1.75
RFC4P35249 AC135803.1-201ENST00000608748 565 ntBASIC4.15□□□□□ -1.75
RFC4P35249 AC105429.2-201ENST00000610567 517 ntBASIC4.15□□□□□ -1.75
RFC4P35249 MIR486-1-201ENST00000612171 68 ntBASIC4.15□□□□□ -1.75
RFC4P35249 AC020658.4-201ENST00000613987 684 ntBASIC4.15□□□□□ -1.75
RFC4P35249 MIR4727-201ENST00000622232 55 ntBASIC4.15□□□□□ -1.75
RFC4P35249 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RFC4P35249 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.15□□□□□ -1.75
RFC4P35249 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RFC4P35249 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RFC4P35249 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RFC4P35249 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RFC4P35249 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RFC4P35249 EXOC5P1-201ENST00000510543 1969 ntBASIC4.14□□□□□ -1.75
RFC4P35249 AC073073.2-201ENST00000609827 2578 ntBASIC4.14□□□□□ -1.75
RFC4P35249 AL031985.3-201ENST00000565390 2449 ntBASIC4.14□□□□□ -1.75
RFC4P35249 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFC4P35249 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.14□□□□□ -1.75
RFC4P35249 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFC4P35249 AC006504.1-201ENST00000562493 3666 ntBASIC4.14□□□□□ -1.75
RFC4P35249 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFC4P35249 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFC4P35249 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RFC4P35249 RNU4-31P-201ENST00000384211 141 ntBASIC4.14□□□□□ -1.75
RFC4P35249 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.14□□□□□ -1.75
RFC4P35249 RPL21P109-201ENST00000422213 475 ntBASIC4.14□□□□□ -1.75
RFC4P35249 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.14□□□□□ -1.75
RFC4P35249 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.14□□□□□ -1.75
RFC4P35249 MED6P1-201ENST00000439659 713 ntBASIC4.14□□□□□ -1.75
RFC4P35249 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.14□□□□□ -1.75
RFC4P35249 AL357552.1-201ENST00000445254 415 ntBASIC4.14□□□□□ -1.75
RFC4P35249 TVP23BP2-201ENST00000455082 615 ntBASIC4.14□□□□□ -1.75
RFC4P35249 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.14□□□□□ -1.75
RFC4P35249 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RFC4P35249 AC008885.1-201ENST00000514930 301 ntBASIC4.14□□□□□ -1.75
RFC4P35249 AC026801.2-201ENST00000515352 425 ntBASIC4.14□□□□□ -1.75
RFC4P35249 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.14□□□□□ -1.75
RFC4P35249 AC074029.2-201ENST00000551045 634 ntBASIC4.14□□□□□ -1.75
RFC4P35249 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.14□□□□□ -1.75
RFC4P35249 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.14□□□□□ -1.75
RFC4P35249 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.14□□□□□ -1.75
RFC4P35249 LINC00216-201ENST00000623548 1126 ntBASIC4.14□□□□□ -1.75
RFC4P35249 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFC4P35249 DCAF13P1-201ENST00000495256 1330 ntBASIC4.14□□□□□ -1.75
RFC4P35249 ZNF33CP-201ENST00000432492 2030 ntBASIC4.14□□□□□ -1.75
RFC4P35249 MTCO1P24-201ENST00000515438 1558 ntBASIC4.14□□□□□ -1.75
RFC4P35249 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFC4P35249 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFC4P35249 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RFC4P35249 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFC4P35249 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.13□□□□□ -1.75
RFC4P35249 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms