Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC010680.4-201ENST00000605334 543 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 U3.45-201ENST00000607547 219 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.46□□□□□ -1.86
SHMT2P34897 AC243312.2-201ENST00000623340 601 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 AP003400.6-201ENST00000624698 740 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 AC112200.1-201ENST00000625015 234 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHMT2P34897 OR8B1P-202ENST00000641132 1178 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.46□□□□□ -1.86
SHMT2P34897 MFSD8-236ENST00000641509 4050 ntBASIC3.46□□□□□ -1.86
SHMT2P34897 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SHMT2P34897 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.46□□□□□ -1.86
SHMT2P34897 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
SHMT2P34897 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SHMT2P34897 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.46□□□□□ -1.86
SHMT2P34897 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHMT2P34897 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHMT2P34897 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
SHMT2P34897 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SHMT2P34897 RNA5SP167-201ENST00000365461 116 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 RNU6-1293P-201ENST00000384077 107 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 MIR23B-201ENST00000384832 97 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.45□□□□□ -1.86
SHMT2P34897 U3.39-201ENST00000408569 239 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AC008173.1-201ENST00000418901 264 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 SDCBPP2-201ENST00000424643 885 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.45□□□□□ -1.86
SHMT2P34897 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.45□□□□□ -1.86
SHMT2P34897 RPL37P1-201ENST00000432310 284 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.45□□□□□ -1.86
SHMT2P34897 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.45□□□□□ -1.86
SHMT2P34897 AC092641.1-201ENST00000440229 772 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 TXNP1-201ENST00000441872 371 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.45□□□□□ -1.86
SHMT2P34897 RPL21P23-201ENST00000446654 460 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.45□□□□□ -1.86
SHMT2P34897 HMGB3P8-201ENST00000449709 577 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 DNAJC19P8-201ENST00000452887 259 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 RPL23AP62-201ENST00000463396 453 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AC126121.1-201ENST00000482313 553 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.45□□□□□ -1.86
SHMT2P34897 ACTG1P13-201ENST00000486987 1043 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 HMGB1P21-201ENST00000502313 581 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 OR5H3P-201ENST00000502817 919 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 MTCO2P9-201ENST00000503214 694 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.45□□□□□ -1.86
SHMT2P34897 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.45□□□□□ -1.86
SHMT2P34897 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.45□□□□□ -1.86
SHMT2P34897 RNU2-27P-201ENST00000516185 142 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHMT2P34897 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.45□□□□□ -1.86
SHMT2P34897 AC103843.2-201ENST00000530523 682 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHMT2P34897 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.45□□□□□ -1.86
SHMT2P34897 AC098483.2-201ENST00000603158 454 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.45□□□□□ -1.86
SHMT2P34897 AC113194.1-201ENST00000606037 500 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AC018926.3-201ENST00000618841 406 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 RNU6-156P-201ENST00000621869 107 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 AC092628.2-201ENST00000622492 339 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.45□□□□□ -1.86
SHMT2P34897 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.45□□□□□ -1.86
SHMT2P34897 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHMT2P34897 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SHMT2P34897 AL365440.1-201ENST00000436135 2167 ntBASIC3.45□□□□□ -1.86
SHMT2P34897 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SHMT2P34897 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.45□□□□□ -1.86
SHMT2P34897 DCAF13P3-201ENST00000561147 1334 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHMT2P34897 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SHMT2P34897 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHMT2P34897 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHMT2P34897 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHMT2P34897 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHMT2P34897 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.44□□□□□ -1.86
SHMT2P34897 BX664727.1-201ENST00000416024 466 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 HMGN2P31-201ENST00000432430 273 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 AC073063.1-201ENST00000434352 607 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SHMT2P34897 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.44□□□□□ -1.86
SHMT2P34897 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.44□□□□□ -1.86
SHMT2P34897 RPS26P30-201ENST00000443431 335 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.44□□□□□ -1.86
SHMT2P34897 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHMT2P34897 SNORD108-201ENST00000459332 71 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 RPL32P14-201ENST00000463196 378 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 AC078785.3-201ENST00000476607 425 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.44□□□□□ -1.86
SHMT2P34897 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.44□□□□□ -1.86
SHMT2P34897 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.44□□□□□ -1.86
SHMT2P34897 RN7SKP13-201ENST00000515933 244 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 Vault.1-201ENST00000516474 102 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.44□□□□□ -1.86
SHMT2P34897 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHMT2P34897 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.44□□□□□ -1.86
SHMT2P34897 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.44□□□□□ -1.86
SHMT2P34897 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.44□□□□□ -1.86
SHMT2P34897 AC092354.2-201ENST00000607786 514 ntBASIC3.44□□□□□ -1.86
SHMT2P34897 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms