Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL9A1P20849 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.78□□□□□ -1.32
COL9A1P20849 SNORD82-201ENST00000365530 70 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL9A1P20849 RNU2-15P-201ENST00000410692 191 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AL030996.1-201ENST00000411430 235 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AC069218.2-201ENST00000411665 344 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.78□□□□□ -1.32
COL9A1P20849 AL354868.1-201ENST00000417077 482 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6.78□□□□□ -1.32
COL9A1P20849 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.78□□□□□ -1.32
COL9A1P20849 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.78□□□□□ -1.32
COL9A1P20849 FABP5P2-201ENST00000439042 408 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AC239809.1-201ENST00000450470 217 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AC006499.3-201ENST00000506077 748 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AC114781.3-201ENST00000512083 142 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AL591767.3-201ENST00000554632 525 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AMZ2P1-203ENST00000565833 850 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AC111186.1-201ENST00000604684 130 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 AL355816.1-201ENST00000607951 118 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 SNHG22-203ENST00000617833 660 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL9A1P20849 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL9A1P20849 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.78□□□□□ -1.32
COL9A1P20849 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.78□□□□□ -1.32
COL9A1P20849 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL9A1P20849 AC092821.3-202ENST00000641304 2767 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.78□□□□□ -1.32
COL9A1P20849 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL9A1P20849 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.78□□□□□ -1.32
COL9A1P20849 AC027575.3-201ENST00000583058 2747 ntBASIC6.78□□□□□ -1.32
COL9A1P20849 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.77□□□□□ -1.32
COL9A1P20849 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
COL9A1P20849 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.77□□□□□ -1.33
COL9A1P20849 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 Y_RNA.439-201ENST00000384119 94 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 RNU6-171P-201ENST00000384354 107 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 RNU6-959P-201ENST00000384671 107 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL9A1P20849 RNU6-754P-201ENST00000391166 107 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 AC096921.1-201ENST00000411661 375 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.77□□□□□ -1.33
COL9A1P20849 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.77□□□□□ -1.33
COL9A1P20849 AC234779.1-201ENST00000425910 285 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.77□□□□□ -1.33
COL9A1P20849 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.77□□□□□ -1.33
COL9A1P20849 RPS14P8-201ENST00000478778 369 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 KHDC1P1-201ENST00000511053 508 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 MTND5P41-201ENST00000517498 206 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 AC104576.1-201ENST00000524225 88 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 AC007956.1-201ENST00000555623 542 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.77□□□□□ -1.33
COL9A1P20849 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 AC097467.4-201ENST00000605504 141 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 AC007998.5-201ENST00000622938 237 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.77□□□□□ -1.33
COL9A1P20849 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.77□□□□□ -1.33
COL9A1P20849 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL9A1P20849 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL9A1P20849 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.77□□□□□ -1.33
COL9A1P20849 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.77□□□□□ -1.33
COL9A1P20849 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL9A1P20849 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.77□□□□□ -1.33
COL9A1P20849 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL9A1P20849 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL9A1P20849 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL9A1P20849 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
COL9A1P20849 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.76□□□□□ -1.33
COL9A1P20849 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.76□□□□□ -1.33
COL9A1P20849 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL9A1P20849 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL9A1P20849 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL9A1P20849 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL9A1P20849 Y_RNA.16-201ENST00000362421 102 ntBASIC6.76□□□□□ -1.33
COL9A1P20849 Y_RNA.581-201ENST00000391017 97 ntBASIC6.76□□□□□ -1.33
COL9A1P20849 RNU6-700P-201ENST00000391043 107 ntBASIC6.76□□□□□ -1.33
COL9A1P20849 AL139039.1-201ENST00000401900 692 ntBASIC6.76□□□□□ -1.33
COL9A1P20849 Y_RNA.626-201ENST00000411288 95 ntBASIC6.76□□□□□ -1.33
COL9A1P20849 RPL19P1-201ENST00000411635 428 ntBASIC6.76□□□□□ -1.33
COL9A1P20849 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.76□□□□□ -1.33
COL9A1P20849 AC069213.2-201ENST00000420238 366 ntBASIC6.76□□□□□ -1.33
COL9A1P20849 AL390119.1-201ENST00000440329 312 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms