Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC010285.1-201ENST00000470580 392 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC010301.1-201ENST00000473936 355 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC146944.2-203ENST00000502493 354 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 MTCYBP37-201ENST00000510642 1133 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC139495.1-202ENST00000513164 354 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC026402.1-201ENST00000513642 170 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 MTCO3P27-201ENST00000514397 196 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 RNU6-885P-201ENST00000516607 104 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 IGKV2D-23-201ENST00000518179 286 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 ARL2BPP5-201ENST00000523141 481 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 ZNF705CP-201ENST00000530515 889 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 ZNF971P-201ENST00000562068 1249 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 MIR4286-201ENST00000580651 93 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC011468.4-201ENST00000603942 409 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC018926.1-201ENST00000616335 435 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC006963.1-201ENST00000624003 1052 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 CR381572.1-201ENST00000625098 102 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC139713.2-210ENST00000641741 992 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC018555.1-201ENST00000567548 1980 ntBASIC3.92□□□□□ -1.78
HLA-DPA1P20036 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPA1P20036 AC000367.1-201ENST00000452711 1766 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 MAPK10-372ENST00000641954 3413 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 RNA5SP258-201ENST00000362750 119 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 Y_RNA.126-201ENST00000363382 111 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 FCF1P2-201ENST00000415284 583 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 OR8F1P-201ENST00000425243 930 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AC005345.1-201ENST00000431868 217 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 KCTD10P1-201ENST00000434203 625 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 NPM1P13-201ENST00000452663 865 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 CFTRP1-201ENST00000456646 183 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AL672167.3-201ENST00000465951 960 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 VN1R105P-201ENST00000486595 910 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 SNORA31.20-201ENST00000517111 133 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 MED28P5-201ENST00000528254 438 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 SYF2P1-201ENST00000550658 413 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 BNIP3P5-201ENST00000562290 498 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AC093519.1-201ENST00000566109 298 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AC010735.1-201ENST00000567305 1026 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 MIR6875-201ENST00000617506 72 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 AC073530.2-201ENST00000623987 261 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 MTND2P41-201ENST00000637599 773 ntBASIC3.91□□□□□ -1.78
HLA-DPA1P20036 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPA1P20036 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.9□□□□□ -1.78
HLA-DPA1P20036 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DPA1P20036 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DPA1P20036 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 RNU6-730P-201ENST00000383954 104 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 HLFP1-201ENST00000402375 499 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AL133384.1-201ENST00000412744 351 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AL391219.1-201ENST00000422570 483 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC093698.1-201ENST00000423843 571 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 RPL31P54-201ENST00000429803 370 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 RPS7P2-201ENST00000435134 607 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 RPL7P28-201ENST00000437739 740 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC127537.2-201ENST00000439258 465 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DPA1P20036 RPS24P6-201ENST00000452670 400 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 HMGN2P16-201ENST00000456802 261 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 AC078785.3-201ENST00000476607 425 ntBASIC3.9□□□□□ -1.79
HLA-DPA1P20036 RPS4XP15-201ENST00000489210 795 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms