Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.34□□□□□ -1.71
RB1P06400 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.34□□□□□ -1.71
RB1P06400 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.34□□□□□ -1.71
RB1P06400 MTND3P19-201ENST00000603825 345 ntBASIC4.34□□□□□ -1.71
RB1P06400 AC012468.1-201ENST00000604888 430 ntBASIC4.34□□□□□ -1.71
RB1P06400 AC016877.3-201ENST00000606778 504 ntBASIC4.34□□□□□ -1.71
RB1P06400 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.34□□□□□ -1.71
RB1P06400 ELL2P4-201ENST00000446870 1376 ntBASIC4.34□□□□□ -1.71
RB1P06400 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.34□□□□□ -1.71
RB1P06400 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RB1P06400 KPNA2P2-201ENST00000419546 1489 ntBASIC4.34□□□□□ -1.71
RB1P06400 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RB1P06400 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RB1P06400 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RB1P06400 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RB1P06400 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RB1P06400 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.72
RB1P06400 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RB1P06400 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RB1P06400 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RB1P06400 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 ZNF33CP-201ENST00000432492 2030 ntBASIC4.33□□□□□ -1.72
RB1P06400 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 ZNF285B-201ENST00000561698 1767 ntBASIC4.33□□□□□ -1.72
RB1P06400 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RB1P06400 AC024560.2-201ENST00000507981 1497 ntBASIC4.33□□□□□ -1.72
RB1P06400 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 RNA5SP22-201ENST00000365393 109 ntBASIC4.33□□□□□ -1.72
RB1P06400 SUGT1P1-201ENST00000379514 476 ntBASIC4.33□□□□□ -1.72
RB1P06400 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RB1P06400 RNU6-413P-201ENST00000384115 107 ntBASIC4.33□□□□□ -1.72
RB1P06400 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RB1P06400 BTBD10P2-201ENST00000404779 676 ntBASIC4.33□□□□□ -1.72
RB1P06400 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.33□□□□□ -1.72
RB1P06400 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.33□□□□□ -1.72
RB1P06400 AC092634.6-201ENST00000418558 192 ntBASIC4.33□□□□□ -1.72
RB1P06400 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RB1P06400 AC096632.1-201ENST00000427395 310 ntBASIC4.33□□□□□ -1.72
RB1P06400 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 Z77249.1-201ENST00000444622 1175 ntBASIC4.33□□□□□ -1.72
RB1P06400 AL034418.1-201ENST00000448675 860 ntBASIC4.33□□□□□ -1.72
RB1P06400 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 AC090013.1-201ENST00000485147 480 ntBASIC4.33□□□□□ -1.72
RB1P06400 RPL29P14-201ENST00000495837 428 ntBASIC4.33□□□□□ -1.72
RB1P06400 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.33□□□□□ -1.72
RB1P06400 AC093755.1-201ENST00000512950 1023 ntBASIC4.33□□□□□ -1.72
RB1P06400 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 PHBP17-201ENST00000528576 541 ntBASIC4.33□□□□□ -1.72
RB1P06400 AP000790.1-201ENST00000528891 737 ntBASIC4.33□□□□□ -1.72
RB1P06400 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 MTCYBP27-201ENST00000555160 670 ntBASIC4.33□□□□□ -1.72
RB1P06400 AC023813.2-201ENST00000564321 469 ntBASIC4.33□□□□□ -1.72
RB1P06400 AC025627.2-201ENST00000576220 160 ntBASIC4.33□□□□□ -1.72
RB1P06400 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.33□□□□□ -1.72
RB1P06400 AP001180.3-201ENST00000582221 145 ntBASIC4.33□□□□□ -1.72
RB1P06400 AC083899.3-201ENST00000603413 594 ntBASIC4.33□□□□□ -1.72
RB1P06400 AL450336.1-201ENST00000605180 586 ntBASIC4.33□□□□□ -1.72
RB1P06400 AC010680.4-201ENST00000605334 543 ntBASIC4.33□□□□□ -1.72
RB1P06400 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 AC023158.2-201ENST00000614876 543 ntBASIC4.33□□□□□ -1.72
RB1P06400 AC026368.1-201ENST00000614934 690 ntBASIC4.33□□□□□ -1.72
RB1P06400 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 FP236240.3-201ENST00000623061 327 ntBASIC4.33□□□□□ -1.72
RB1P06400 AP001002.2-201ENST00000625137 386 ntBASIC4.33□□□□□ -1.72
RB1P06400 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 AC026634.1-201ENST00000634369 198 ntBASIC4.33□□□□□ -1.72
RB1P06400 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RB1P06400 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RB1P06400 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.33□□□□□ -1.72
RB1P06400 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RB1P06400 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
RB1P06400 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RB1P06400 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RB1P06400 NACA3P-201ENST00000359690 648 ntBASIC4.32□□□□□ -1.72
RB1P06400 RNU6-251P-201ENST00000363235 104 ntBASIC4.32□□□□□ -1.72
RB1P06400 RNU6-636P-201ENST00000384598 107 ntBASIC4.32□□□□□ -1.72
RB1P06400 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RB1P06400 AC069218.2-201ENST00000411665 344 ntBASIC4.32□□□□□ -1.72
RB1P06400 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.32□□□□□ -1.72
RB1P06400 AL592310.1-201ENST00000414330 671 ntBASIC4.32□□□□□ -1.72
RB1P06400 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.32□□□□□ -1.72
RB1P06400 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.32□□□□□ -1.72
RB1P06400 GTF2IP23-201ENST00000423746 351 ntBASIC4.32□□□□□ -1.72
RB1P06400 MTCO2P17-201ENST00000424336 677 ntBASIC4.32□□□□□ -1.72
RB1P06400 AC091390.3-201ENST00000426478 338 ntBASIC4.32□□□□□ -1.72
RB1P06400 AC091286.1-201ENST00000431233 461 ntBASIC4.32□□□□□ -1.72
RB1P06400 AC005345.1-201ENST00000431868 217 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms