Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 AC067852.4-201ENST00000590314 478 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 AC124312.4-201ENST00000605533 310 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 AC012531.5-201ENST00000611375 151 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 MIR3651-201ENST00000630427 90 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 MIR622-201ENST00000638396 96 ntBASIC3.11□□□□□ -1.91
HLA-DQB2P05538 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DQB2P05538 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 RAD1P1-201ENST00000231383 813 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AL049610.1-201ENST00000423374 372 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 USP9YP31-201ENST00000431405 881 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 RPS3AP43-201ENST00000479743 781 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AP001086.1-201ENST00000494882 321 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 KCTD9P5-201ENST00000504141 1170 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 MTND5P21-201ENST00000531961 522 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC008083.2-201ENST00000546707 476 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 MIR3186-201ENST00000577404 85 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AP001180.3-201ENST00000582221 145 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC012493.2-201ENST00000595083 291 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 NF1P10-201ENST00000613227 742 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC116563.2-201ENST00000624751 535 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 AC019080.5-201ENST00000624891 757 ntBASIC3.1□□□□□ -1.91
HLA-DQB2P05538 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQB2P05538 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AL512649.1-201ENST00000428997 581 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 UBE2V2P1-201ENST00000434717 398 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 FTH1P1-201ENST00000437933 532 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 VN1R48P-201ENST00000448149 1036 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 RNU7-27P-201ENST00000459281 62 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 RPS27P29-201ENST00000463110 252 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AL049830.2-201ENST00000480072 201 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 PTGES3P3-201ENST00000511479 482 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC034244.2-201ENST00000514668 858 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC008885.1-201ENST00000514930 301 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 BNIP3P33-201ENST00000598912 569 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AL162574.2-201ENST00000614618 657 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AL590410.1-201ENST00000617925 333 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 U6.98-201ENST00000637157 84 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQB2P05538 SEPT7P7-201ENST00000420492 1301 ntBASIC3.09□□□□□ -1.91
HLA-DQB2P05538 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.92
HLA-DQB2P05538 AC138393.1-206ENST00000540997 1886 ntBASIC3.09□□□□□ -1.92
HLA-DQB2P05538 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-DQB2P05538 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.92
HLA-DQB2P05538 RNF6P1-201ENST00000444889 1784 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQB2P05538 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 EI24P2-201ENST00000397776 1076 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 AL353692.2-201ENST00000407054 335 ntBASIC3.08□□□□□ -1.92
HLA-DQB2P05538 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms