Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC006254.3-201ENST00000603353 884 ntBASIC2.97□□□□□ -1.93
TNFP01375 IGHV3-29-201ENST00000604817 344 ntBASIC2.97□□□□□ -1.93
TNFP01375 AL096803.3-201ENST00000609032 532 ntBASIC2.97□□□□□ -1.93
TNFP01375 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.97□□□□□ -1.93
TNFP01375 AL450489.1-201ENST00000612071 468 ntBASIC2.97□□□□□ -1.93
TNFP01375 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TNFP01375 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.97□□□□□ -1.93
TNFP01375 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.97□□□□□ -1.93
TNFP01375 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TNFP01375 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
TNFP01375 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
TNFP01375 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TNFP01375 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
TNFP01375 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TNFP01375 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TNFP01375 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TNFP01375 SNORA80A-201ENST00000363922 136 ntBASIC2.96□□□□□ -1.94
TNFP01375 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
TNFP01375 AC007390.1-201ENST00000415722 356 ntBASIC2.96□□□□□ -1.94
TNFP01375 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.96□□□□□ -1.94
TNFP01375 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.96□□□□□ -1.94
TNFP01375 AC073069.1-201ENST00000428657 441 ntBASIC2.96□□□□□ -1.94
TNFP01375 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.96□□□□□ -1.94
TNFP01375 AP000893.1-201ENST00000474462 794 ntBASIC2.96□□□□□ -1.94
TNFP01375 AC011037.1-201ENST00000483964 558 ntBASIC2.96□□□□□ -1.94
TNFP01375 AC096576.1-201ENST00000489014 359 ntBASIC2.96□□□□□ -1.94
TNFP01375 PRELID3BP6-201ENST00000503839 571 ntBASIC2.96□□□□□ -1.94
TNFP01375 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TNFP01375 SNORA64.4-201ENST00000516632 81 ntBASIC2.96□□□□□ -1.94
TNFP01375 AC107016.2-201ENST00000547968 190 ntBASIC2.96□□□□□ -1.94
TNFP01375 AL121839.1-201ENST00000556233 1185 ntBASIC2.96□□□□□ -1.94
TNFP01375 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.96□□□□□ -1.94
TNFP01375 MIR7106-201ENST00000612419 65 ntBASIC2.96□□□□□ -1.94
TNFP01375 AC009318.3-201ENST00000616916 503 ntBASIC2.96□□□□□ -1.94
TNFP01375 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TNFP01375 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TNFP01375 AF117829.1-206ENST00000621883 3802 ntBASIC2.95□□□□□ -1.94
TNFP01375 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TNFP01375 RAD1P1-201ENST00000231383 813 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC245291.1-201ENST00000419501 328 ntBASIC2.95□□□□□ -1.94
TNFP01375 RPS12P23-201ENST00000419579 400 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC006960.1-201ENST00000419980 153 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC073464.3-201ENST00000422564 712 ntBASIC2.95□□□□□ -1.94
TNFP01375 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.95□□□□□ -1.94
TNFP01375 SETP5-201ENST00000437270 562 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC107083.1-201ENST00000439643 279 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.95□□□□□ -1.94
TNFP01375 RPS12P18-201ENST00000442381 270 ntBASIC2.95□□□□□ -1.94
TNFP01375 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.95□□□□□ -1.94
TNFP01375 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.95□□□□□ -1.94
TNFP01375 TVP23BP2-201ENST00000455082 615 ntBASIC2.95□□□□□ -1.94
TNFP01375 RPS4XP13-201ENST00000483219 789 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC012170.1-201ENST00000495139 359 ntBASIC2.95□□□□□ -1.94
TNFP01375 AL035404.1-201ENST00000497982 568 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC083906.5-201ENST00000503722 328 ntBASIC2.95□□□□□ -1.94
TNFP01375 RN7SKP289-201ENST00000517244 295 ntBASIC2.95□□□□□ -1.94
TNFP01375 SCARNA20.6-201ENST00000517251 106 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.95□□□□□ -1.94
TNFP01375 AC104027.1-201ENST00000521887 300 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.95□□□□□ -1.94
TNFP01375 AC025260.1-201ENST00000548858 430 ntBASIC2.95□□□□□ -1.94
TNFP01375 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.95□□□□□ -1.94
TNFP01375 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
TNFP01375 AF127577.6-201ENST00000623352 2191 ntBASIC2.95□□□□□ -1.94
TNFP01375 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
TNFP01375 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TNFP01375 MTND5P24-201ENST00000438892 1767 ntBASIC2.95□□□□□ -1.94
TNFP01375 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
TNFP01375 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TNFP01375 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TNFP01375 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.94□□□□□ -1.94
TNFP01375 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TNFP01375 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
TNFP01375 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TNFP01375 RNA5SP383-201ENST00000362934 120 ntBASIC2.94□□□□□ -1.94
TNFP01375 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.94□□□□□ -1.94
TNFP01375 RNU6-851P-201ENST00000384565 107 ntBASIC2.94□□□□□ -1.94
TNFP01375 RNA5SP274-201ENST00000410484 108 ntBASIC2.94□□□□□ -1.94
TNFP01375 AIMP1P1-201ENST00000418670 937 ntBASIC2.94□□□□□ -1.94
TNFP01375 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.94□□□□□ -1.94
TNFP01375 RPS20P5-201ENST00000434808 360 ntBASIC2.94□□□□□ -1.94
TNFP01375 AC025750.2-201ENST00000442609 450 ntBASIC2.94□□□□□ -1.94
TNFP01375 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.94□□□□□ -1.94
TNFP01375 VN1R96P-201ENST00000446052 858 ntBASIC2.94□□□□□ -1.94
TNFP01375 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TNFP01375 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.94□□□□□ -1.94
TNFP01375 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.94□□□□□ -1.94
TNFP01375 SNRPGP3-201ENST00000469405 227 ntBASIC2.94□□□□□ -1.94
TNFP01375 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.94□□□□□ -1.94
TNFP01375 AC117440.1-201ENST00000474107 571 ntBASIC2.94□□□□□ -1.94
TNFP01375 AC092451.1-201ENST00000480211 153 ntBASIC2.94□□□□□ -1.94
TNFP01375 RPL23AP44-201ENST00000482216 473 ntBASIC2.94□□□□□ -1.94
TNFP01375 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.94□□□□□ -1.94
TNFP01375 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.94□□□□□ -1.94
TNFP01375 AC093331.1-201ENST00000521474 169 ntBASIC2.94□□□□□ -1.94
TNFP01375 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.94□□□□□ -1.94
TNFP01375 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.94□□□□□ -1.94
TNFP01375 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.94□□□□□ -1.94
TNFP01375 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.94□□□□□ -1.94
TNFP01375 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms