Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX4O60224 ANKRD26P4-201ENST00000455755 950 ntBASIC3.91□□□□□ -1.78
SSX4O60224 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSX4O60224 UBTFL6-201ENST00000477929 1024 ntBASIC3.91□□□□□ -1.78
SSX4O60224 AC068587.2-201ENST00000478386 781 ntBASIC3.91□□□□□ -1.78
SSX4O60224 MTND2P14-201ENST00000482139 351 ntBASIC3.91□□□□□ -1.78
SSX4O60224 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX4O60224 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSX4O60224 RNY4P37-201ENST00000516225 96 ntBASIC3.91□□□□□ -1.78
SSX4O60224 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX4O60224 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 OR5BC1P-201ENST00000529327 739 ntBASIC3.91□□□□□ -1.78
SSX4O60224 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.91□□□□□ -1.78
SSX4O60224 AC107016.1-201ENST00000550463 337 ntBASIC3.91□□□□□ -1.78
SSX4O60224 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 AC090888.2-201ENST00000559765 1144 ntBASIC3.91□□□□□ -1.78
SSX4O60224 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.91□□□□□ -1.78
SSX4O60224 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.91□□□□□ -1.78
SSX4O60224 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX4O60224 OR4G1P-201ENST00000588632 938 ntBASIC3.91□□□□□ -1.78
SSX4O60224 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX4O60224 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSX4O60224 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX4O60224 AC020914.4-201ENST00000597690 277 ntBASIC3.91□□□□□ -1.78
SSX4O60224 AL009028.1-201ENST00000604895 802 ntBASIC3.91□□□□□ -1.78
SSX4O60224 AC069304.2-201ENST00000605154 435 ntBASIC3.91□□□□□ -1.78
SSX4O60224 ARF4P1-201ENST00000605447 541 ntBASIC3.91□□□□□ -1.78
SSX4O60224 HMGB1P50-201ENST00000605814 607 ntBASIC3.91□□□□□ -1.78
SSX4O60224 MIR6716-201ENST00000613413 80 ntBASIC3.91□□□□□ -1.78
SSX4O60224 AC092650.2-201ENST00000619984 902 ntBASIC3.91□□□□□ -1.78
SSX4O60224 AC068724.3-201ENST00000625906 87 ntBASIC3.91□□□□□ -1.78
SSX4O60224 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSX4O60224 AC005539.1-201ENST00000443768 1479 ntBASIC3.91□□□□□ -1.78
SSX4O60224 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSX4O60224 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.91□□□□□ -1.78
SSX4O60224 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SSX4O60224 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.9□□□□□ -1.78
SSX4O60224 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SSX4O60224 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
SSX4O60224 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 MIR3074-201ENST00000384885 81 ntBASIC3.9□□□□□ -1.79
SSX4O60224 SNRPEP2-201ENST00000397592 279 ntBASIC3.9□□□□□ -1.79
SSX4O60224 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 RN7SKP177-201ENST00000410567 355 ntBASIC3.9□□□□□ -1.79
SSX4O60224 OR8G2P-201ENST00000412796 908 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AC092647.1-201ENST00000420654 287 ntBASIC3.9□□□□□ -1.79
SSX4O60224 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX4O60224 MTATP6P17-201ENST00000431030 672 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX4O60224 MTND2P20-201ENST00000440805 661 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX4O60224 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX4O60224 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX4O60224 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 RPL7P38-201ENST00000488396 739 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX4O60224 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.9□□□□□ -1.79
SSX4O60224 AC005798.1-201ENST00000513715 387 ntBASIC3.9□□□□□ -1.79
SSX4O60224 SNORA3.4-201ENST00000515969 96 ntBASIC3.9□□□□□ -1.79
SSX4O60224 IGHV3-32-201ENST00000519182 355 ntBASIC3.9□□□□□ -1.79
SSX4O60224 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX4O60224 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX4O60224 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.9□□□□□ -1.79
SSX4O60224 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX4O60224 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX4O60224 AC008127.2-201ENST00000549925 1075 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AL109766.1-201ENST00000555080 552 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AC068831.4-201ENST00000556118 109 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX4O60224 AC009094.1-201ENST00000564443 426 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AC009712.1-201ENST00000564938 316 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.9□□□□□ -1.79
SSX4O60224 MIR432-201ENST00000606207 94 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AC090948.1-201ENST00000607464 549 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AC012409.3-201ENST00000611343 981 ntBASIC3.9□□□□□ -1.79
SSX4O60224 AC023043.4-201ENST00000612081 449 ntBASIC3.9□□□□□ -1.79
SSX4O60224 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX4O60224 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX4O60224 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SSX4O60224 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms