Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RNA5SP27-201ENST00000363839 119 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC007066.1-201ENST00000392902 381 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 RPL7P60-201ENST00000397636 735 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 MTATP6P31-201ENST00000406985 692 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 MIR1303-201ENST00000408625 86 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 ATP5A1P2-201ENST00000412323 255 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC126124.2-201ENST00000413542 321 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC008173.1-201ENST00000418901 264 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 UBE2V1P6-201ENST00000430840 422 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 USP9YP31-201ENST00000431405 881 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 MRPS18BP2-201ENST00000434310 759 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AL359073.1-201ENST00000448036 403 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 OR5H3P-201ENST00000502817 919 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC112518.2-201ENST00000508565 425 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 RN7SKP82-201ENST00000516786 223 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC008562.1-201ENST00000521763 330 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 MTND1P36-201ENST00000522384 936 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC090751.1-201ENST00000566966 267 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC020914.6-201ENST00000594327 272 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC006254.3-201ENST00000603353 884 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC006077.1-201ENST00000604746 343 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC107294.3-201ENST00000609211 526 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC069209.1-201ENST00000619282 651 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AC024595.1-201ENST00000623088 387 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AP003355.3-201ENST00000623465 114 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 SEC63P2-201ENST00000503863 1939 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 AL049737.1-201ENST00000413920 1403 ntBASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.26□□□□□ -1.89
TRAPPC4Q9Y296 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 RNA5SP51-201ENST00000364750 119 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 RPL21P17-201ENST00000397467 475 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AL583834.1-201ENST00000406943 343 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 RNA5SP107-201ENST00000411358 122 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC092745.2-202ENST00000411880 369 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 PTP4A1P5-201ENST00000420305 455 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AL035423.1-201ENST00000420331 213 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 SDCBPP2-201ENST00000424643 885 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 MTCO2P1-201ENST00000424648 477 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC092017.2-201ENST00000427600 362 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AP000907.1-201ENST00000428428 510 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AL035246.1-201ENST00000433554 1255 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 RPS7P5-201ENST00000441482 581 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AL158053.1-201ENST00000441503 453 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 RPL6P5-201ENST00000445678 828 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AL035407.2-201ENST00000454090 378 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 CEACAMP4-201ENST00000457676 421 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 HMGB3P30-201ENST00000457863 606 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC008379.1-201ENST00000463655 464 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC023598.1-201ENST00000472521 361 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC008565.1-201ENST00000509046 885 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 RN7SKP18-201ENST00000516005 275 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 COX6B1P6-201ENST00000522347 255 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC007991.1-201ENST00000522680 631 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 C1DP5-201ENST00000525775 383 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 UBE2NP1-201ENST00000545592 458 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC023161.2-201ENST00000551218 780 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 TRAV37-201ENST00000553906 342 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC006270.2-201ENST00000578523 652 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AP000919.1-202ENST00000581139 1264 ntBASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.25□□□□□ -1.89
TRAPPC4Q9Y296 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms