Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 DCAF13P3-201ENST00000561147 1334 ntBASIC3.92□□□□□ -1.78
HACD3Q9P035 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.92□□□□□ -1.78
HACD3Q9P035 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HACD3Q9P035 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HACD3Q9P035 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.92□□□□□ -1.78
HACD3Q9P035 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
HACD3Q9P035 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HACD3Q9P035 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HACD3Q9P035 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HACD3Q9P035 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.91□□□□□ -1.78
HACD3Q9P035 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HACD3Q9P035 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.91□□□□□ -1.78
HACD3Q9P035 Y_RNA.578-201ENST00000390903 88 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 PAICSP7-201ENST00000419829 962 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.91□□□□□ -1.78
HACD3Q9P035 AC004975.1-201ENST00000428733 208 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 USP9YP7-201ENST00000436723 430 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.91□□□□□ -1.78
HACD3Q9P035 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.91□□□□□ -1.78
HACD3Q9P035 USP9YP32-201ENST00000452432 430 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 MTCO3P16-201ENST00000454456 754 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 AC096992.1-201ENST00000459808 709 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.91□□□□□ -1.78
HACD3Q9P035 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.91□□□□□ -1.78
HACD3Q9P035 HMGB1P21-201ENST00000502313 581 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.91□□□□□ -1.78
HACD3Q9P035 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.91□□□□□ -1.78
HACD3Q9P035 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.91□□□□□ -1.78
HACD3Q9P035 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HACD3Q9P035 OR10V3P-201ENST00000525712 725 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 OR8R1P-201ENST00000543943 764 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.91□□□□□ -1.78
HACD3Q9P035 AC004217.3-201ENST00000551552 878 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.91□□□□□ -1.78
HACD3Q9P035 MTCYBP23-201ENST00000558717 1102 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HACD3Q9P035 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.91□□□□□ -1.78
HACD3Q9P035 MTCO2P2-201ENST00000591258 225 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.91□□□□□ -1.78
HACD3Q9P035 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.91□□□□□ -1.78
HACD3Q9P035 AL606490.9-201ENST00000603331 271 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 RNU4-5P-201ENST00000607255 135 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.91□□□□□ -1.78
HACD3Q9P035 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HACD3Q9P035 AF001550.2-201ENST00000636643 217 ntBASIC3.91□□□□□ -1.78
HACD3Q9P035 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HACD3Q9P035 SGO1P1-201ENST00000603525 1447 ntBASIC3.9□□□□□ -1.78
HACD3Q9P035 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.9□□□□□ -1.78
HACD3Q9P035 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HACD3Q9P035 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HACD3Q9P035 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HACD3Q9P035 MIR372-201ENST00000362225 67 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 RNU6-619P-201ENST00000365146 108 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HACD3Q9P035 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HACD3Q9P035 RNU6-224P-201ENST00000384055 107 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 MIR16-1-201ENST00000385271 89 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
HACD3Q9P035 HLFP1-201ENST00000402375 499 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 OR51A3P-201ENST00000413596 924 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.9□□□□□ -1.79
HACD3Q9P035 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HACD3Q9P035 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.9□□□□□ -1.79
HACD3Q9P035 AC091390.1-201ENST00000433904 331 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.9□□□□□ -1.79
HACD3Q9P035 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.9□□□□□ -1.79
HACD3Q9P035 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.9□□□□□ -1.79
HACD3Q9P035 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.9□□□□□ -1.79
HACD3Q9P035 RPS17P13-201ENST00000448974 407 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.9□□□□□ -1.79
HACD3Q9P035 NUTF2P7-201ENST00000453086 375 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.9□□□□□ -1.79
HACD3Q9P035 RPL7L1P8-201ENST00000469911 741 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AC108729.1-201ENST00000487812 947 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AC079203.1-201ENST00000487972 404 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.9□□□□□ -1.79
HACD3Q9P035 AC010460.1-201ENST00000507087 466 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AC090071.1-201ENST00000507713 644 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.9□□□□□ -1.79
HACD3Q9P035 RNA5SP309-201ENST00000516670 106 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.9□□□□□ -1.79
HACD3Q9P035 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.9□□□□□ -1.79
HACD3Q9P035 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
HACD3Q9P035 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.9□□□□□ -1.79
HACD3Q9P035 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.9□□□□□ -1.79
HACD3Q9P035 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.9□□□□□ -1.79
HACD3Q9P035 BPTFP1-201ENST00000579209 492 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.9□□□□□ -1.79
HACD3Q9P035 MIR4666A-201ENST00000580160 79 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 MIR4286-201ENST00000580651 93 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AP001542.2-201ENST00000593141 364 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AC020910.2-201ENST00000603635 610 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AL583856.2-201ENST00000606298 543 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AP004247.3-201ENST00000608682 624 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AP000238.1-201ENST00000608759 426 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AL109659.3-201ENST00000624985 950 ntBASIC3.9□□□□□ -1.79
HACD3Q9P035 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms