Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC079880.2-201ENST00000603790 1213 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC245389.2-201ENST00000616023 576 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC242843.1-201ENST00000618702 573 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 DCAF13P3-201ENST00000561147 1334 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 AC107081.3-201ENST00000612715 2034 ntBASIC3.12□□□□□ -1.91
HMG20AQ9NP66 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.12□□□□□ -1.91
HMG20AQ9NP66 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC093831.2-201ENST00000624393 3427 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 OR4A15-201ENST00000314706 1035 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 RNU2-6P-201ENST00000411404 190 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AL356968.1-201ENST00000416622 474 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 RPL30P3-201ENST00000424262 333 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 HMGB3P11-201ENST00000440127 604 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 PTGES3P5-201ENST00000455109 434 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 RN7SL594P-201ENST00000470590 287 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC007688.1-201ENST00000475592 759 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 VN1R105P-201ENST00000486595 910 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC111193.1-201ENST00000504097 155 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 RPL12P22-201ENST00000519073 490 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 OSBPL9P3-201ENST00000534523 595 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC007224.1-201ENST00000564410 144 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC087499.8-201ENST00000578406 226 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 MAGOH2P-202ENST00000584384 429 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC007423.1-201ENST00000605009 627 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AL163051.2-201ENST00000618976 735 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC024341.1-201ENST00000526444 1552 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AC017071.1-201ENST00000564407 2204 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMG20AQ9NP66 AL353743.1-202ENST00000431724 1695 ntBASIC3.11□□□□□ -1.91
HMG20AQ9NP66 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 SDCBPP2-201ENST00000424643 885 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 GAPDHP27-201ENST00000447427 1020 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 RPS20P21-201ENST00000466859 343 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 RN7SL385P-201ENST00000468873 276 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 RPL21P18-201ENST00000469899 480 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 RN7SL132P-201ENST00000478131 296 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 RPL30P11-201ENST00000495304 339 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 MTND3P24-201ENST00000506306 329 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 AC118282.1-201ENST00000506408 765 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 AC010285.3-201ENST00000511668 676 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 AC119751.1-201ENST00000513357 765 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 AC139103.1-201ENST00000534696 1030 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 AC079148.1-201ENST00000565944 819 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 MIR5187-201ENST00000583479 76 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 PCNAP1-202ENST00000595299 752 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 AC097460.3-201ENST00000623099 442 ntBASIC3.1□□□□□ -1.91
HMG20AQ9NP66 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMG20AQ9NP66 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms