Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL390879.2-203ENST00000426943 1121 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 USP9YP31-201ENST00000431405 881 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 SNORA71B-202ENST00000439232 272 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 SETD6P1-201ENST00000444575 317 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 RPL23AP23-201ENST00000452590 471 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AL136097.1-201ENST00000456945 913 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 RNU6-1231P-201ENST00000517185 103 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 SYF2P1-201ENST00000550658 413 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC012182.1-201ENST00000570133 895 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC005412.1-201ENST00000580812 1049 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 EIF1P6-201ENST00000600054 334 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 ZNF37BP-203ENST00000452306 1352 ntBASIC3.76□□□□□ -1.81
TM9SF3Q9HD45 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 SNORD51.1-201ENST00000365405 77 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 MIR483-201ENST00000385070 76 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 MIR591-201ENST00000385290 95 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 RPL30P2-201ENST00000414021 291 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AC245052.5-201ENST00000416320 649 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AL513174.1-201ENST00000423182 629 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AP000907.1-201ENST00000428428 510 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 RPS3AP46-201ENST00000448352 682 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AC104978.1-201ENST00000449387 391 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 UBDP1-202ENST00000457888 382 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 snoU13.24-201ENST00000458998 104 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AP000893.1-201ENST00000474462 794 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 RNF138P1-201ENST00000502765 546 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 HMGB3P15-201ENST00000507326 574 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AC074250.1-201ENST00000511117 192 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AC021146.1-201ENST00000511202 716 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 MTCO2P32-201ENST00000514865 403 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 RNU6-362P-201ENST00000516736 90 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 RNU6-1073P-201ENST00000517182 106 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AP001207.1-201ENST00000524051 481 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 OR4G1P-201ENST00000588632 938 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 RNU1-30P-201ENST00000606575 163 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 MTND4P8-201ENST00000514997 1362 ntBASIC3.75□□□□□ -1.81
TM9SF3Q9HD45 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 SEC63P2-201ENST00000503863 1939 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 MIR491-201ENST00000384877 84 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 MIR218-2-201ENST00000385006 110 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 RPL7P60-201ENST00000397636 735 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC008280.1-201ENST00000418851 412 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 NEK4P1-201ENST00000433383 879 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 RPS27P5-201ENST00000444247 244 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 MTCO3P20-201ENST00000454926 688 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 CABYRP1-201ENST00000465493 1045 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC087879.1-201ENST00000474343 374 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 DSTNP2-201ENST00000504533 515 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC004069.2-201ENST00000505438 1114 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 SNORA70.24-201ENST00000517233 118 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC083923.1-201ENST00000523708 376 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AP004371.1-201ENST00000525240 214 ntBASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.74□□□□□ -1.81
TM9SF3Q9HD45 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms